Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01169 ATGAGGCAACAATCCCTTTCCCTAGCATCATCTTTACTCATACTCATATACTTCCACTCCTTCATTGCTGCTGATCTGAACTCAGACAAGCAAGCTCTTCTCGACTTCATTTCGACCGTTCGGCACGGTCGAAAACTCAACTGGGATTCTTCTACCTCAGTCTGCACTACATGGATTGGCATCACTTGCACCTCAGACCGCTCAAACGTGCTCGCTCTTAGGCTGCCTGCTGTTGGTCTATACGGTCCGATCCCCGCCAATACACTCGGAAAGTTACACGCTCTTAGAACTCTGAGTCTTCGATCTAACAATCTTTTCGGAAACGTTCCATCAGATGTTCTAGCCCTCCCCTCCTTAAAGTTTATGTATCTTCAACACAATAACTTTTCAGGTAAAATTCCTTCTTCCCTGTCTCCTAGCCTTACCTTCCTCGACCTGTCTTTCAACGATCTCTCCGGGGACATCCCGACGTCGATACGAACCTTAACGCACCTCATTAGCCTCAACCTTCAAAACAACTCCCTGACTGGATCCATTCCTGATATTGGTCAGCTAAAGCTTAAGCTATTGAACTTGAGCTACAACCATCTTAGTGGTCCTATTCCTGGTTCTTTGCAATCATTTCCTGCTTCATCCTTTGAAGGGAACTTAAAGCTATGTGGCTCTCCTCTGAAAACTTGCTCGGTTAATATCGCCCCCGTACCGTCGTCGTCTCCTCCCGAGAGGGAAAGGAGCATAAATATCGGAGCGATCGTTGCCATTGGATTAGGTGGTTCTGCAGTGCTGTTCCTCCTTGTGTTGATGATTATTGTCTGTTGTATGAAGAAAAAAGATGGTGAAGGTAGTACTGATGCAATGAAAGGAGCTCGTAAAAGAACCGAGCAACCGAAGGAGGATTTCGGAAGCGGGGTACAAGAGGCCGAGAAGAATAGGCTGGTTTTCTTTGAAGGATGTTCGTATAATTTTGATCTCGACGACTTGTTAAGAGCCTCGGCCGAGGTGCTCGGAAAAGGTAGTTATGGGACTACTTACAAGGCAATCTTGGAGGAAGGAACAACAGTTGTAGTAAAGAGGTTGAAAGAAATGGTAGCTGGGAAAAAGGAATTTGATCAACAAATGGAGATTGTTGGGAGGATAGGCCAGCATCGAAACGTCGTACCGCTCCGTGCCTATTACTATTCGAAAGACGAGAAGCTTTTAGTTTACGATTATGCCATCGTTGGAAGCTTTTCGACATTACTCCATGGAACCCGAGAAGGCGGTCGGGTGCCACCGGATTGGGAAACGAGACTGAAGGTTTCATTAGGGAGTGCCAAAGGCCTTGCACATATTCATTCAAAGTTCATCCATGGAAACATAAAGTCCTCTAACATCCTTCTCACACAAGACCTTAATGGTTGTATATCCGATTTTGGGCGGACTCATTTGATGAACTCCGCTGCCGTTCCGTCTAGAAGCATAGGGTATCGAGCTCCCGAGGTGATCGAGACTCGAAAGTTGACTCAAAAGTCTGATGTTTATAGCTTTGGAGTTGTTTTGCTCGAGATGTTGACTAGGAAAGCTCCAGCCCAATCGCCGGGGCGTGACGAGGTCATGGACCTTCCTAGATGGGTGCAATCTGTGGTTAGAGAGGAATGGACATCAGAGGTGTTTGATGTAGAGCTAATGAAGTATGAGAACATTGAAGAAGAGTTGGTTCAAATGCTTCAAATAGCAATGGCATGTGTGTCTCGAGTGCCTGATATGAGACCAACGATGGAGGAAGTCGTAAGGATGATCGAGGATATTCGACCATCTAGCTCGGGAACTCAACCATCATCAGAAGATAACAAAACCGGAGACGGGGACAATGACTCGAATACTCCGACCTTGTAA 1875 46.19 MRQQSLSLASSLLILIYFHSFIAADLNSDKQALLDFISTVRHGRKLNWDSSTSVCTTWIGITCTSDRSNVLALRLPAVGLYGPIPANTLGKLHALRTLSLRSNNLFGNVPSDVLALPSLKFMYLQHNNFSGKIPSSLSPSLTFLDLSFNDLSGDIPTSIRTLTHLISLNLQNNSLTGSIPDIGQLKLKLLNLSYNHLSGPIPGSLQSFPASSFEGNLKLCGSPLKTCSVNIAPVPSSSPPERERSINIGAIVAIGLGGSAVLFLLVLMIIVCCMKKKDGEGSTDAMKGARKRTEQPKEDFGSGVQEAEKNRLVFFEGCSYNFDLDDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEMVAGKKEFDQQMEIVGRIGQHRNVVPLRAYYYSKDEKLLVYDYAIVGSFSTLLHGTREGGRVPPDWETRLKVSLGSAKGLAHIHSKFIHGNIKSSNILLTQDLNGCISDFGRTHLMNSAAVPSRSIGYRAPEVIETRKLTQKSDVYSFGVVLLEMLTRKAPAQSPGRDEVMDLPRWVQSVVREEWTSEVFDVELMKYENIEEELVQMLQIAMACVSRVPDMRPTMEEVVRMIEDIRPSSSGTQPSSEDNKTGDGDNDSNTPTL 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7070982 7072934 + Carg12643-RA Car07g01169 152403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01169 624 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Car07g01169 624 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Car07g01169 624 MobiDBLite consensus disorder prediction 597 624 - -
Car07g01169 624 MobiDBLite consensus disorder prediction 595 624 - -
Car07g01169 624 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515
Car07g01169 624 ProSitePatterns Protein kinases ATP-binding region signature. 335 366 IPR017441 GO:0005524
Car07g01169 624 Pfam Protein kinase domain 332 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01169 624 MobiDBLite consensus disorder prediction 279 302 - -
Car07g01169 624 ProSiteProfiles Protein kinase domain profile. 329 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00246 Car07g01169 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00118 Car-Chr4:623801 Car07g01169 Car-Chr7:7070982 1.55E-12 dispersed
Car05g01237 Car-Chr5:11570461 Car07g01169 Car-Chr7:7070982 0 dispersed
Car07g01169 Car-Chr7:7070982 Car20g00263 Car-Chr20:1527659 0 dispersed
Car18g01209 Car-Chr18:11665514 Car07g01169 Car-Chr7:7070982 0 dispersed
Car03g00246 Car-Chr3:3686194 Car07g01169 Car-Chr7:7070982 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89011 PF00069 Pkinase 7.90E-36 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01169 - - csv:101210437 1020.38