Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01172 ATGGTTCGATACCGAAGCCATTGGTTGCCACCATCTTCATCTTCTTCCCCATTTCCTCTGGAAGCTTTGGATTCTTCTCGAGTTAGCTGTTCATCTTGTTCTGATCTACTGGAACAAGTTTTCGAGTTGATTCATGAAGGAAATCCATCACCACAAAACTACATCCCTCGGGATTTCATTCTCCTCAATTGTGGAGGACCTTCCACTGCCGACGACATGGATGGCCGGAAATGGATGACCGATGACAAATCCAAGTTTCTTCCCGCGACAGGGAATAGCACTACATCGAGAGCGGCTACTCAGGTTCCTTCAGTTCTTGAAACTCCTTTCATGACGGCTAGGGTTTTTCACTCTAATTTCACCTATACCTTTCCTGTGGCTCCTACTCGTTTATTCCTTCGTCTGTACTTTTATCCTTCTTCCTATAGCGGCCTTGATGCATCTGATGCTCGATTCTCTGTTTCCGCTCAAACCTATACTCTCCTTAATAACTTCAGCGCTTCACAAACCGCTGAGGCTTTGTATTCTGCGACTATCGTTAAGGAATACTCGATCAATGTTGAAAATGGAAGGTTGAGCTTGACTTTCACTCCATCCCCCACTCATCCAAAGGCTTATGCGTTTGTTAACGGGATTGAAATTGTATCTATGCCTGATATTTACAGTGAAACTTCCGGGACTGTTTTGATTGTTGGCCAATCTAGTCCTTTCACTGTGGATAACACCACTGCGCTCGAGAACATCCATCGGTTGAATGTCGGAGGGAATTATATTTCGCCTTCTGCTGATACGGGGATGCATAGGCCTTGGTTTGATGATTCTCCATATTTGTTTGCTGCAGCAAAGGGAGTGACAACGATTACGGATCAGAACACAAGGATTAGTTATCCTCCCAGTATTTCTACTTATGTTGCGCCGGTTGATGTCTACTCTACTGCTAGAACTATGGGACCTGATAACAATGTCAATCTGAATTATAATTTGACATGGGTTTTCTCTGTTGATTCTGGCTTCTTTTACCTTGTTAGGCTCCATTTTTGTGAGATTGCTGCAGGTATCACGAAGGTTAACCAAAGAGTGTTCGACATTTTCATCTTTAATCAAACTGCTACGCTGGGTGTTGACGTGATTGAATCGGCTGGAAGTAATTATGCTCCTGTGTTCAAAGATTATGTGGTTATGGTTCCAAGTTATGGAGATCCGCAGAAGGATTTATGGCTCCAGCTGCATCCACACAAGTCTTCACGACCCAATTACTATGATTCAATCTTGAACGGAGTGGAGATCTTCAAAATTAACAACTCGGATGCTAATCTTGCAGGGCCGAATCCTGTTCCTGCAGCGAAACAAGAGATTATAGATCCATCATTAGCCATCCCAGGATCATCTCACGGTAAAACGAAGAACAGGATGGCGATTATAGCTGGAGTTGTTTGTGGTGCAGTTGTTTTGGGTCTGATCATTGGTTTCTTTGTTGTTGCTGCTAAGCGTCGGCGTGGGATGGATTGTATTTCTGTCACAGGACAATCAGGATGGCTTACTCTTTCTGTCTATGGAAATTCCCCTTTGGCTGAGATAAATGCAACTGGAAGCTATGCATCCTCCCTGCTTTCCAATTGCCGCCACTTCTCATTTGCTGAGATCAAGGCTGCCACAAGGGAGTTTGATGAATCTTTAGTACTTGGAGTGGGAGGTTTTGGCAAAGTTTACAAGGGAGAAATTGATGGTGGGACTAGGAAAGTTGCTATCAAGCGTGGGAACCCTCTCTCGGAGCAAGGTGTTCATGAGTTCCAAACTGAGATTGAAATGCTGTCTAAGCTTCGCCATCGCCACCTTGTTTCATTGATTGGCTACTGCGAAGAGAATTGTGAAATGATCCTTGTTTATGATTACATGTCTCGTGGAACACTCCGTGAGCATCTCTACAAGACCCACAACCCACCATTGTCTTGGAAGCAAAGGCTTGAGATTTGCATTGGAGCTGCCCGTGGACTGCATTATCTGCACACTGGTGCCAAGCATACAATTATTCACCGAGATGTGAAGACAACCAATATCCTTTTGGATGAAAAGTGGGTGGCAAAAGTATCCGATTTCGGGTTGTCGAAAACTGGTCCGACATTGGATCACACACATGTTAGCACTGTAGTGAAAGGTAGTTTTGGATACTTGGATCCTGAATACTTTAGACGACAGCAATTGACTGAGAAATCAGATGTTTACTCGTTCGGTGTCGTTCTCTTCGAGGTTCTATGCGCTCGGCCAGCTCTGAACCCAACACTCCCCAAGGAGGAAGTGAGTTTAGCAGAATGGGCTGCTCATTGCTACATCAAAGGTGTTTTAGATCAGATAATCGACACGTTCCTAAAGGGAAAGATTGCATCCGAGTGTCTCAAGAAGTTCGCGGAGACAGCAATGAAATGTGTGTCCGATCAGGGCATTGACAGGCCGTCCATTGGCGACGTTCTCTGGAATCTAGAGTTTGCATTGCAGCTGCAGGAGAGTGCAGAAGAGAGCGGCGAGGTACGCAGCGGAATGGAAGTCGAAGGTCAGCTTGAAGTTGCTTACAAAGGGAAGATGGATCCTGATGCTTCCCCTGGCATGGATGGAAACATAACCGACTCGAGAAGCACCGGAATCAGTATGAGCATCGGAGGCCGAAGCCTCGCCAGTGAAGATTCCTACGGGTTGACACCGAGTACCGTCTTCTCACAGATCTTGAACCCAAAAGGTCGTTAA 2739 45.42 MVRYRSHWLPPSSSSSPFPLEALDSSRVSCSSCSDLLEQVFELIHEGNPSPQNYIPRDFILLNCGGPSTADDMDGRKWMTDDKSKFLPATGNSTTSRAATQVPSVLETPFMTARVFHSNFTYTFPVAPTRLFLRLYFYPSSYSGLDASDARFSVSAQTYTLLNNFSASQTAEALYSATIVKEYSINVENGRLSLTFTPSPTHPKAYAFVNGIEIVSMPDIYSETSGTVLIVGQSSPFTVDNTTALENIHRLNVGGNYISPSADTGMHRPWFDDSPYLFAAAKGVTTITDQNTRISYPPSISTYVAPVDVYSTARTMGPDNNVNLNYNLTWVFSVDSGFFYLVRLHFCEIAAGITKVNQRVFDIFIFNQTATLGVDVIESAGSNYAPVFKDYVVMVPSYGDPQKDLWLQLHPHKSSRPNYYDSILNGVEIFKINNSDANLAGPNPVPAAKQEIIDPSLAIPGSSHGKTKNRMAIIAGVVCGAVVLGLIIGFFVVAAKRRRGMDCISVTGQSGWLTLSVYGNSPLAEINATGSYASSLLSNCRHFSFAEIKAATREFDESLVLGVGGFGKVYKGEIDGGTRKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMSRGTLREHLYKTHNPPLSWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPTLPKEEVSLAEWAAHCYIKGVLDQIIDTFLKGKIASECLKKFAETAMKCVSDQGIDRPSIGDVLWNLEFALQLQESAEESGEVRSGMEVEGQLEVAYKGKMDPDASPGMDGNITDSRSTGISMSIGGRSLASEDSYGLTPSTVFSQILNPKGR 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7090046 7093065 - Carg12646-RA Car07g01172 152406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01172 912 ProSitePatterns Protein kinases ATP-binding region signature. 561 584 IPR017441 GO:0005524
Car07g01172 912 ProSiteProfiles Protein kinase domain profile. 555 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01172 912 Pfam Protein tyrosine and serine/threonine kinase 560 822 IPR001245 GO:0004672|GO:0006468
Car07g01172 912 Pfam Malectin-like domain 62 432 IPR024788 -
Car07g01172 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 676 688 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01140 Car-Chr5:10873406 Car07g01172 Car-Chr7:7090046 0 dispersed
Car07g01172 Car-Chr7:7090046 Car12g01100 Car-Chr12:10723567 0 dispersed
Car15g00240 Car-Chr15:1340757 Car07g01172 Car-Chr7:7090046 0 dispersed
Car03g00249 Car-Chr3:3698283 Car07g01172 Car-Chr7:7090046 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89012 PF12819 Malectin_like 1.10E-40 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01172 - - cpep:111781600 1743.78