Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01182 ATGGCGGTTTCTCCTCATTCTTTTCCACCGAGGAAGCGCCGGCCGTCGGCGGCGGCATTCGTCTCCCCAAATTTCTCCGCACAAGCTCTCCTTGACTCACTTCTCTGTCTCTGCCAAGAAATCTCCGCCATGAAACCGCTTCACTTCCTTCTCAACCGCTACTCCAACTCCATGATTCGAAAATCGCGATTGCTCGAGGTTATTCTCGAGGATTTCCGTCGCGATCGGATTGTTTCTCTTTCGGCCTCTGCCTCGCTCTGTCTCGAAGAAATGTATATCGTTTTGCAGAGAATCAAGACCTTGATTGAAGACTGTTCTAATGGAAGCAAGATGTGGCTACTTACACAGAACGAATCTATTGCTAATAATTTTCATGAACTCACCTTGGATTTATCGACTCTTCTTGATATTTTTCCTGTGAAGGACGCTGGATTAACGGAAGACGTTGAGGAATTGTTCTATCTCTTGAGAAATCATTGCTCTGAATCCTCCGCCTTCGTCGATCCGAGAGATGAAGATCTCCGATTCAGAGTTTTGAAAACGATCGATCAGATTAGAGACGAAATCGTTCCGGATTATACCGAGTTGTCAGAGATTTTCTCGAGGATTGATCTTCGAGATTCTTCGAGTTGCAGAGAGGAAATCGAGAATCTCGAAGACGAGGTACAGAATCAAACGGATGAGAAATCGAGATCTGATGTGATTGCGTTGATCGGATTTGTTCGTTACGCGAAATGCGTTCTCTACGGCGCATCGACGCCGGAATCTGGATTTCAGCGGAAGGATTCGATCTCCGATTTGGCTTTACCAGCGGATTTCAGGTGTCCGATTAGTCTGGATTTAATGCACGATCCTGTAGTCGTGGCAACAGGTCATACGTATGATCGTGCGGCCATTACGCTCTGGATTGAATCTGGGCATAACACGTGTCCCAAGACAGGTCAGACTCTGGCCCACACGGACCTAATTCCGAACCGGGCTTTGAAAAATTTGATAGCGATGTGGTGCCGTCAGGAGAGAATTCCGTTTGACGTAACGGAAAGTAACAAGGGGGGTATTAACGGCGTTACGTTAAACAAAGCGGCTTTGGAAGCAATGAGAATGACGGCGTCGTTTCTTGTTAACAAACTCGCAACGCCATTAGATTCCGTAAACGACGCGAACGGCGTCGTTTACGAGCTTCGTGTTTTGGCCAAAACAGATTCCGGCAGCCGTGGATTCATCGCGCAAGCCGGAGCTCTGCCGTTGCTTGTACGTCACCTCATCTCCGACGACCCGACTCTGCAAGTTAACGCCGTCACGACGGTACTCAACCTCTCTATTCTTGAAGCGAACAAGTCTCTGATTATGGAGACCGACGGCGCGTTGATTGGAGTGATTGAGGTGCTCCGGTCCGGCGCCACGTGGGAGGCGAAAGGGAACGCCGCTGCCACAATCTTCAGCCTATCCAGTGTCCATAGTTACCGGCGGAGATTAGGAAGGAAGACACGTGTCATAAGGGGATTGCTCGATTTGGCCAAAGACGGGCCGATTAGTTCGAAGAGGGATGCTCTGGTGACGATTCTGACATTAGCCGGTGATCGAGAGACCGTCGGGAGGTTAATTGAAGGTGGGGTTATGGAGACGGTGAGCCATGTAATGAACAGTTTACCGGAGGAGGCGGTGACGATTCTGGAAATGGTGGTGAGGAAAGGGGGATTTGTGGCGATTGCTTCGGCGTTCAATCTGATTAAGAAATTGGGGGCGGTTTTGAGAGAAGGCTCCGATAGAGCCCGAGAGAGCGCCGCGGCGGCACTGGTGACAATGTGCCGGCAAGGTGGGTCGGACATGGTGACTGAACTGGCATCGATGGCCGGAATTGAGAGAGTCATTTGGGAGATGATGGGGAGTGGGACGATGAGGGGACGGCGGAAAGCGGCGTCGCTGTTGAGAATACTTCGACGATGGGCGGCGGGTTTGGACAGAAACGGCGGCGTGGGCGGAGGAGACTTAACGATGGTGAGTTCTTCAAGAATGGTCGGCGATTCCACCACCATTGTTAGTCCATCGAGCGGAGCAATTGTTAATAGCTAG 2073 50.65 MAVSPHSFPPRKRRPSAAAFVSPNFSAQALLDSLLCLCQEISAMKPLHFLLNRYSNSMIRKSRLLEVILEDFRRDRIVSLSASASLCLEEMYIVLQRIKTLIEDCSNGSKMWLLTQNESIANNFHELTLDLSTLLDIFPVKDAGLTEDVEELFYLLRNHCSESSAFVDPRDEDLRFRVLKTIDQIRDEIVPDYTELSEIFSRIDLRDSSSCREEIENLEDEVQNQTDEKSRSDVIALIGFVRYAKCVLYGASTPESGFQRKDSISDLALPADFRCPISLDLMHDPVVVATGHTYDRAAITLWIESGHNTCPKTGQTLAHTDLIPNRALKNLIAMWCRQERIPFDVTESNKGGINGVTLNKAALEAMRMTASFLVNKLATPLDSVNDANGVVYELRVLAKTDSGSRGFIAQAGALPLLVRHLISDDPTLQVNAVTTVLNLSILEANKSLIMETDGALIGVIEVLRSGATWEAKGNAAATIFSLSSVHSYRRRLGRKTRVIRGLLDLAKDGPISSKRDALVTILTLAGDRETVGRLIEGGVMETVSHVMNSLPEEAVTILEMVVRKGGFVAIASAFNLIKKLGAVLREGSDRARESAAAALVTMCRQGGSDMVTELASMAGIERVIWEMMGSGTMRGRRKAASLLRILRRWAAGLDRNGGVGGGDLTMVSSSRMVGDSTTIVSPSSGAIVNS 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7160467 7162539 - Carg12656-RA Car07g01182 152416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01182 690 ProSiteProfiles U-box domain profile. 268 342 IPR003613 GO:0004842|GO:0016567
Car07g01182 690 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 412 454 IPR000225 GO:0005515
Car07g01182 690 Pfam Armadillo/beta-catenin-like repeat 404 440 IPR000225 GO:0005515
Car07g01182 690 Pfam U-box domain 270 340 IPR003613 GO:0004842|GO:0016567
Car07g01182 690 Coils Coil 208 235 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00261 Car07g01182 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01182 Car-Chr7:7160467 Car18g00408 Car-Chr18:2545138 1.12E-132 dispersed
Car03g00261 Car-Chr3:3805432 Car07g01182 Car-Chr7:7160467 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01182 - - cmax:111465978 1300.03