Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01183 ATGCCGGAATTCGACGGCGGCGACTCTTCACCGGAGGGGATTCTGTTCGGAAAATATGAACTCGGGAAGCTTTTAGGCCGTGGAGCCTTCGCGAAGGTCTACCATGGCAGAAACGTCTTAAATGGCGGTTTCACGGCGCACGTTAAGAGAGAAATTGATATCATGCGCCGCCTCCGCCATCCCAACGTCGTTCGTCTTTTCGAAGTTCTTGCAACGAAGACGAAGATTTATTTCGTAATGGAATTCGCCAAAGGCGGAGAGCTTTTCACGAAGGTTTCCAAAGGACGATTCAGTGAGAATCTCAGCCGTCGATATTTTCAGCAATTGATTACCGCCGTTGGATACTGTCATTCCAGAGGAATTTTTCATCGCGATTTGAAACCGGAAAATCTCCTTCTCGATGAAAATTTTGATCTCAGAGTTTCGGATTTTGGACTCGGTGCTTTAACGGATCAGATTCGCCCCGACGGATTGCTCCATACACTCTGTGGAACTCCGGCGTACGTCGCGCCGGAGATTCTCGCGAAGAAAGGCTACGACGGCGCGAAGATCGACGTCTGGTCTTGCGGTATAATCCTCTATGTTCTTACTGCTGGATTTCTTCCGTTCAATGATTCCAATTTAATGGCGATGTATCGGAAGATTTACAGAGGCGATTTCCGGTGTCCGAAATGGACGTCGCCAGATCTCCGGCGGTTTTTATCGCGGCTTCTGGATACGAATCCGGAGACGAGGATCACCGTCGATGAGATTCATCAAGATCCGTGGTTCAGAAAGGGATTTCAAGAGGAGAAGATTCAATTCGAGGATTATTCGGTTTCAGAGCTTTACGGCGATATGAACAATGCGAAATGTTTGAATGCTTTTGATTTAATTTCGTTCTCTCTTTGCTTCGATTCAACTGGATTGATCAACGAGACGGAATTTTCGTCCGATGTTGAGAGGTTTCTCTCCGCCGAATCGCCGGAGAAGATCATAATGACGGTGGAGGAGGTTTCGAAGTCGGCAAATGCGGCGGTGGAGAAGAACGGGTGGGGAGTTAGAGTGGAAGGGCACGACGGCGGATTCGTCGCCGTTATAGAGATTTTCCGGCTGACGGAGGAATTGGTGTTTTAA 1116 48.48 MPEFDGGDSSPEGILFGKYELGKLLGRGAFAKVYHGRNVLNGGFTAHVKREIDIMRRLRHPNVVRLFEVLATKTKIYFVMEFAKGGELFTKVSKGRFSENLSRRYFQQLITAVGYCHSRGIFHRDLKPENLLLDENFDLRVSDFGLGALTDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKIDVWSCGIILYVLTAGFLPFNDSNLMAMYRKIYRGDFRCPKWTSPDLRRFLSRLLDTNPETRITVDEIHQDPWFRKGFQEEKIQFEDYSVSELYGDMNNAKCLNAFDLISFSLCFDSTGLINETEFSSDVERFLSAESPEKIIMTVEEVSKSANAAVEKNGWGVRVEGHDGGFVAVIEIFRLTEELVF 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7170469 7172046 + Carg12658-RA Car07g01183 152417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01183 371 ProSiteProfiles Protein kinase domain profile. 19 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01183 371 Pfam Protein kinase domain 20 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01183 371 Pfam NAF domain 284 342 IPR004041 GO:0007165
Car07g01183 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00512 Car-Chr2:4003411 Car07g01183 Car-Chr7:7170469 5.78E-178 dispersed
Car03g00275 Car-Chr3:3923870 Car07g01183 Car-Chr7:7170469 0 dispersed
Car07g01183 Car-Chr7:7170469 Car20g00275 Car-Chr20:1595226 7.80E-168 dispersed
Car03g00262 Car-Chr3:3818687 Car07g01183 Car-Chr7:7170469 3.47E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89014 PF00069 Pkinase 8.30E-61 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01183 - K12761 csv:116403168 644.425