Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car07g01185 | ATGGAGAAGAAAGGGGCTATCTTGATGCAACGTTATGAATTAGGAAGGCTGTTGGGGCAGGGAACCTTTGCCAAGGTTTACTATGCCAGAGACATTAAAACTGGCTTGTGTGTGGCTATTAAAGTTATTGACAAAGAGAAGATCTCGAAGGTTGGGATGATTGATCAAATCAAGAGGGAGATCTCTGTCATGAGAATAGTTAAGCATCCGAACGTAGTTGAACTTTATGAGGTTATGGCAAGCAAAACTAAAATTTACTTTGTCATGGAATATGTCAAAGGTGGTGAGCTATTCAATAAGGTATCCAAAGGGAAGCTTAAAGAAGGTGCTGCACGGAAATTCTTTTGGCAGCTGATCAGTGCTATCGATTATTGCCACAGTAGAGGCGTATGGCATCGAGATTTGAAACCAGAAAATTTACTACTGGATGAACATGGTAATCTGAAGGTTTCTGATTTTGGGTTGAGTGCTCTTGTTGAATCTAAATGCCAAGATGGGTTGCTCCATACTACCTGTGGAACACCTGCTTACGTTGCTCCAGAAGTCATTAACAGGAGAGGTTATGATGGATGCAAAGCTGATATTTGGTCATGTGGAGTGATCTTATTCGTTCTATTGGCTGGTTATCTTCCATTTCATGATTCAAATCTAATGGAAATGTATAAGAAGATTGGAAAAGGAGAATTTAAATTCCCCAACTGGTTTACGCCAGAGGCGCGCAGGCTATTGTCGAAGATTTTGGATCCTAACCCAAATACTAGGATATCTATCGCCAAAATAATGGGAAGTTCTTGGTCAAGGAGGGGGTTGGATGTGAAACCCCGAATTAAAGCAGAAGAAGTGAAAGATGTCGATCCTTCAGAAGTCGATGCAGTTTTTGGGTCTTCAACGGACGAGAGAGATTCTGTTAGAGAGCTGAAGCAATTAGTGGAAAAGCCATCGAATTTGAATGCCTTTGACATTATTTCCTTATCAGCAGGTTTTGATTTGACAGGTTTGTTCGAGGAGACTACTGATCAAAAGAAAGAAGTAAGATTCACATCAAACAAGCCTGCGCCCACCATCATCTCAAAACTGCAAGATCTCGCAAAGTGCATGAAACTGAAAATAATGAAGAAAGACAGAGGCGTATTGAAGATCGAAGGGTGTAAGGAAGGTCGAAAAGGACCTGTATGCATCGACGCCGAGATTTTTGAAGTTGCCCCATCATTCCATGTAGTCGAAATGAAGAAATCGAACGGAGATACTCTGGAATATCATAAGATCATGAAAGAGGATATAAGACCTGCTCTGAAGGATATTGTATGGACCTGGCAAGGCGAGCAGCAACAGCAAGAACAAGTGCTACAACAGTGTCTTTGA | 1362 | 41.34 | MEKKGAILMQRYELGRLLGQGTFAKVYYARDIKTGLCVAIKVIDKEKISKVGMIDQIKREISVMRIVKHPNVVELYEVMASKTKIYFVMEYVKGGELFNKVSKGKLKEGAARKFFWQLISAIDYCHSRGVWHRDLKPENLLLDEHGNLKVSDFGLSALVESKCQDGLLHTTCGTPAYVAPEVINRRGYDGCKADIWSCGVILFVLLAGYLPFHDSNLMEMYKKIGKGEFKFPNWFTPEARRLLSKILDPNPNTRISIAKIMGSSWSRRGLDVKPRIKAEEVKDVDPSEVDAVFGSSTDERDSVRELKQLVEKPSNLNAFDIISLSAGFDLTGLFEETTDQKKEVRFTSNKPAPTIISKLQDLAKCMKLKIMKKDRGVLKIEGCKEGRKGPVCIDAEIFEVAPSFHVVEMKKSNGDTLEYHKIMKEDIRPALKDIVWTWQGEQQQQEQVLQQCL | 453 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7195590 | 7196951 | - | Carg12660-RA | Car07g01185 | 152419 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car07g01185 | 453 | Pfam | Protein kinase domain | 12 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car07g01185 | 453 | Pfam | NAF domain | 313 | 372 | IPR004041 | GO:0007165 | |
Car07g01185 | 453 | ProSiteProfiles | NAF domain profile. | 311 | 335 | IPR018451 | GO:0007165 | |
Car07g01185 | 453 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 130 | 142 | IPR008271 | GO:0004672|GO:0006468 | |
Car07g01185 | 453 | ProSitePatterns | Protein kinases ATP-binding region signature. | 18 | 41 | IPR017441 | GO:0005524 | |
Car07g01185 | 453 | ProSiteProfiles | Protein kinase domain profile. | 12 | 266 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car03g00265 | Car07g01185 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car07g00152 | Car-Chr7:901940 | Car07g01185 | Car-Chr7:7195590 | 1.64E-178 | dispersed | |
Car07g01185 | Car-Chr7:7195590 | Car13g00481 | Car-Chr13:7049770 | 0 | dispersed | |
Car18g00395 | Car-Chr18:2439682 | Car07g01185 | Car-Chr7:7195590 | 1.33E-169 | dispersed | |
Car10g00919 | Car-Chr10:6982102 | Car07g01185 | Car-Chr7:7195590 | 0 | transposed | |
Car20g00276 | Car-Chr20:1597906 | Car07g01185 | Car-Chr7:7195590 | 5.26E-165 | transposed | |
Car03g00265 | Car-Chr3:3839361 | Car07g01185 | Car-Chr7:7195590 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89015 | PF00069 | Pkinase | 8.40E-75 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car07g01185 | K07198 | - | csv:116406388 | 761.14 |