Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01185 ATGGAGAAGAAAGGGGCTATCTTGATGCAACGTTATGAATTAGGAAGGCTGTTGGGGCAGGGAACCTTTGCCAAGGTTTACTATGCCAGAGACATTAAAACTGGCTTGTGTGTGGCTATTAAAGTTATTGACAAAGAGAAGATCTCGAAGGTTGGGATGATTGATCAAATCAAGAGGGAGATCTCTGTCATGAGAATAGTTAAGCATCCGAACGTAGTTGAACTTTATGAGGTTATGGCAAGCAAAACTAAAATTTACTTTGTCATGGAATATGTCAAAGGTGGTGAGCTATTCAATAAGGTATCCAAAGGGAAGCTTAAAGAAGGTGCTGCACGGAAATTCTTTTGGCAGCTGATCAGTGCTATCGATTATTGCCACAGTAGAGGCGTATGGCATCGAGATTTGAAACCAGAAAATTTACTACTGGATGAACATGGTAATCTGAAGGTTTCTGATTTTGGGTTGAGTGCTCTTGTTGAATCTAAATGCCAAGATGGGTTGCTCCATACTACCTGTGGAACACCTGCTTACGTTGCTCCAGAAGTCATTAACAGGAGAGGTTATGATGGATGCAAAGCTGATATTTGGTCATGTGGAGTGATCTTATTCGTTCTATTGGCTGGTTATCTTCCATTTCATGATTCAAATCTAATGGAAATGTATAAGAAGATTGGAAAAGGAGAATTTAAATTCCCCAACTGGTTTACGCCAGAGGCGCGCAGGCTATTGTCGAAGATTTTGGATCCTAACCCAAATACTAGGATATCTATCGCCAAAATAATGGGAAGTTCTTGGTCAAGGAGGGGGTTGGATGTGAAACCCCGAATTAAAGCAGAAGAAGTGAAAGATGTCGATCCTTCAGAAGTCGATGCAGTTTTTGGGTCTTCAACGGACGAGAGAGATTCTGTTAGAGAGCTGAAGCAATTAGTGGAAAAGCCATCGAATTTGAATGCCTTTGACATTATTTCCTTATCAGCAGGTTTTGATTTGACAGGTTTGTTCGAGGAGACTACTGATCAAAAGAAAGAAGTAAGATTCACATCAAACAAGCCTGCGCCCACCATCATCTCAAAACTGCAAGATCTCGCAAAGTGCATGAAACTGAAAATAATGAAGAAAGACAGAGGCGTATTGAAGATCGAAGGGTGTAAGGAAGGTCGAAAAGGACCTGTATGCATCGACGCCGAGATTTTTGAAGTTGCCCCATCATTCCATGTAGTCGAAATGAAGAAATCGAACGGAGATACTCTGGAATATCATAAGATCATGAAAGAGGATATAAGACCTGCTCTGAAGGATATTGTATGGACCTGGCAAGGCGAGCAGCAACAGCAAGAACAAGTGCTACAACAGTGTCTTTGA 1362 41.34 MEKKGAILMQRYELGRLLGQGTFAKVYYARDIKTGLCVAIKVIDKEKISKVGMIDQIKREISVMRIVKHPNVVELYEVMASKTKIYFVMEYVKGGELFNKVSKGKLKEGAARKFFWQLISAIDYCHSRGVWHRDLKPENLLLDEHGNLKVSDFGLSALVESKCQDGLLHTTCGTPAYVAPEVINRRGYDGCKADIWSCGVILFVLLAGYLPFHDSNLMEMYKKIGKGEFKFPNWFTPEARRLLSKILDPNPNTRISIAKIMGSSWSRRGLDVKPRIKAEEVKDVDPSEVDAVFGSSTDERDSVRELKQLVEKPSNLNAFDIISLSAGFDLTGLFEETTDQKKEVRFTSNKPAPTIISKLQDLAKCMKLKIMKKDRGVLKIEGCKEGRKGPVCIDAEIFEVAPSFHVVEMKKSNGDTLEYHKIMKEDIRPALKDIVWTWQGEQQQQEQVLQQCL 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7195590 7196951 - Carg12660-RA Car07g01185 152419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01185 453 Pfam Protein kinase domain 12 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01185 453 Pfam NAF domain 313 372 IPR004041 GO:0007165
Car07g01185 453 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Car07g01185 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Car07g01185 453 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Car07g01185 453 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00265 Car07g01185 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00152 Car-Chr7:901940 Car07g01185 Car-Chr7:7195590 1.64E-178 dispersed
Car07g01185 Car-Chr7:7195590 Car13g00481 Car-Chr13:7049770 0 dispersed
Car18g00395 Car-Chr18:2439682 Car07g01185 Car-Chr7:7195590 1.33E-169 dispersed
Car10g00919 Car-Chr10:6982102 Car07g01185 Car-Chr7:7195590 0 transposed
Car20g00276 Car-Chr20:1597906 Car07g01185 Car-Chr7:7195590 5.26E-165 transposed
Car03g00265 Car-Chr3:3839361 Car07g01185 Car-Chr7:7195590 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89015 PF00069 Pkinase 8.40E-75 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01185 K07198 - csv:116406388 761.14