Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01197 ATGGGAGCCTGCTGCACAAAAGATTCAATCAATGGAGGAGGAGGAGGAGGAGGAGGAGAGTACATGACCCATGATAAGGATGAGAGGGATTCCAACCGGGGAGATGATGGAGCAGAGATTCGTCGTGGCGACGACGGAGCCATCGTTCGACTCCATGGATCCTCTGCGTTCATATCAATGTATACTCAACGAGGAAGAAAAGGAATCAATCAAGATGCAATGACGGTTTGGGAGGATTTCTCAGGGGAGAAAGGTTTGGTGTTTTCTGGAGTTTTTGATGGCCATGGTCCGTTTGGTCATAGGGTTGCTCGCCATGCACGAGACATGCTGCCCTCCAAGCTCTCCAAGGCTATCAAAAAGCAGCAGCGGCCATCACATCTCCAAAATGGGGTTTCTAAAGCTTCTGTTCAACCAAACAACAATGAAGGAAATCAACGAAATCCATTGGTTTCAAGATGGGAAGCTGCTTTTGAAGAAGCTTACACGGATTTTGATCGAGACCTCGGCTTTGATTCATCTATTGATTGTTTCTGCAGTGGAACAACAGCCATGTCCATTATCAAACAGGGAGAGCATTTGGTGGTTGCAAATGTGGGCGACTCCCGGGCGGTTCTTTGCACCAGAGGAGACAACCATCAGCATATTCCCATCCAATTAACAGCTGACCAGAAACCAAATGTTCCAAGCGAAGCAGAAAGAATAAAGAAATGCCAGGGGAGAATCACAGCAGATAAAGAAGAACCAGATATTTACAGAGTATGGGTACCAGATGCAGATTATCCTGGCCTCGCCATGTCAAGATCCTTTGGAGATTTTTGCCTCAAGGATTACGGCCTCATCCCAACCCCTGAAGTCGCCTACAGAAAACTCACAAGAAAAGACGAGTTCATCGTTCTAGCAACAGATGGAATCTGGGATGTACTGACGAACAAGCAAGTAATCAACATAGTTGCTTCAGCAAAGAACCGATCCATGGCGGCGAAATTAGTAGTGAAACTAGCAGCACGAGAATGGAAACGAAAATTTATAGGGTTGACGATCGACGACTGTACAGTGATTTGCTTGTTCTTCAAGAATCCACCATTGCTGAGCAAATCAATGACGAACGTAGGGCGGCGGAGCATGAGAAGCCATCCGGAACTGGCATTTTCAAGAAGCTGTAGATCCATGGGGATCGACAGAAAAATAGGAGAAGAAGAAGGTGAATCAGTGAATAGAGAATCAAAGGAAGATCGGAAGGGTGTAAAAGGATTAAACAGAGTGAATTCAATGATGGGGATTTCACGAACCACTAGGAGCTTGAGCCACAATCAGAAAGCGCCCAAGTTTTTCTATGAAATTGAAGCTCGCGAAAGCGTCACTGCAATGGCGAAGGGCGAGAAGAAGAAGAACTAA 1395 46.02 MGACCTKDSINGGGGGGGGEYMTHDKDERDSNRGDDGAEIRRGDDGAIVRLHGSSAFISMYTQRGRKGINQDAMTVWEDFSGEKGLVFSGVFDGHGPFGHRVARHARDMLPSKLSKAIKKQQRPSHLQNGVSKASVQPNNNEGNQRNPLVSRWEAAFEEAYTDFDRDLGFDSSIDCFCSGTTAMSIIKQGEHLVVANVGDSRAVLCTRGDNHQHIPIQLTADQKPNVPSEAERIKKCQGRITADKEEPDIYRVWVPDADYPGLAMSRSFGDFCLKDYGLIPTPEVAYRKLTRKDEFIVLATDGIWDVLTNKQVINIVASAKNRSMAAKLVVKLAAREWKRKFIGLTIDDCTVICLFFKNPPLLSKSMTNVGRRSMRSHPELAFSRSCRSMGIDRKIGEEEGESVNRESKEDRKGVKGLNRVNSMMGISRTTRSLSHNQKAPKFFYEIEARESVTAMAKGEKKKN 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7286803 7289344 + Carg12672-RA Car07g01197 152431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01197 464 MobiDBLite consensus disorder prediction 1 41 - -
Car07g01197 464 MobiDBLite consensus disorder prediction 121 146 - -
Car07g01197 464 MobiDBLite consensus disorder prediction 21 41 - -
Car07g01197 464 Coils Coil 457 464 - -
Car07g01197 464 MobiDBLite consensus disorder prediction 119 146 - -
Car07g01197 464 ProSiteProfiles PPM-type phosphatase domain profile. 57 357 IPR001932 -
Car07g01197 464 Pfam Protein phosphatase 2C 81 334 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00283 Car07g01197 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01197 Car-Chr7:7286803 Car01g00441 Car-Chr1:2524632 2.03E-112 dispersed
Car03g00283 Car-Chr3:3978011 Car07g01197 Car-Chr7:7286803 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01197 - - cpep:111780962 917.531