Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01217 ATGGCTGCAGCTCAGCTCACAGGATCTCTAATTTCTGCGAGGAACCTGCCTTCTTTCGATGGCCTTCGTCCTTCTGCGGTGAAATTCTCTCCTTCTATCGCTCATATGATAGTGGGGGGTCGGGCCAACAGATCTTACACTGGCTTGGTTGTTAGAGCTGCTACTGTGGTTGCTCCAAAGTACACTTCGATCAAGCCATTGGGCGACAGAGTGTTGGTGAAAATAAAGGAAGCTGAAGAGAAGACTGATGGAGGGATTTTACTTCCAACAACAGCTCAGTCCAAACCTCAAGGTGGGGAGGTTGTTGCGGTTGGAGAAGGCAAGTCAATTGGAAATACCAAAGTGGAAAGTAGTGTAAAGACTGGTGCTCAAGTTGTGTACTCCAAGTATGCTGGAACTGAGTTAGAGTTCAATGGTTCAAAGCATCTTATTCTGAAGGAAGATGATATCGTCGGTATTCTAGAAACCGATGATGCGAAAGATCTTCAGCCCCTAAACGACAGGGTCTTGATCAAGGTGGCTGCGGCTGAGGAAAAAACAGCAGGAGGTTTGCTGCTGACAGAGGCATCCAAAGAGAAACCGTCGATCGGAACGGTGATAGCAGTTGGCCCTGGTCATCTGGACGAGGAGGGCAACAAGAAACCGCTTTCGATTGCAGCGGGAAATAACGTGATGTACTCGAAGTATGCTGGGAACGAGTTCAAGGGCAAAGATGGATCTGATTACATCGCTTTGAGGGCTTCAGACGTGATTGCAGTTCTATCTTAG 768 47.92 MAAAQLTGSLISARNLPSFDGLRPSAVKFSPSIAHMIVGGRANRSYTGLVVRAATVVAPKYTSIKPLGDRVLVKIKEAEEKTDGGILLPTTAQSKPQGGEVVAVGEGKSIGNTKVESSVKTGAQVVYSKYAGTELEFNGSKHLILKEDDIVGILETDDAKDLQPLNDRVLIKVAAAEEKTAGGLLLTEASKEKPSIGTVIAVGPGHLDEEGNKKPLSIAAGNNVMYSKYAGNEFKGKDGSDYIALRASDVIAVLS 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7431675 7434978 + Carg12692-RA Car07g01217 152451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01217 255 Pfam Chaperonin 10 Kd subunit 64 153 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car07g01217 255 Pfam Chaperonin 10 Kd subunit 162 253 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car07g01217 255 ProSitePatterns Chaperonins cpn10 signature. 64 88 IPR018369 GO:0005524|GO:0006457
Car07g01217 255 ProSitePatterns Chaperonins cpn10 signature. 162 186 IPR018369 GO:0005524|GO:0006457
Car07g01217 255 Hamap Co-chaperonin GroES [groES]. 63 155 IPR020818 GO:0005524|GO:0006457|GO:0140662
Car07g01217 255 Hamap Co-chaperonin GroES [groES]. 161 255 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01074 Car-Chr7:6359103 Car07g01217 Car-Chr7:7431675 2.80E-07 dispersed
Car07g01217 Car-Chr7:7431675 Car10g00705 Car-Chr10:3649030 6.31E-166 dispersed
Car07g01217 Car-Chr7:7431675 Car17g00059 Car-Chr17:324703 2.55E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01217 K04078 - csv:101212396 449.514