Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01248 ATGGCTGACCCATATTCCAATTCATTAGCTAGTCTTCTAAAATTCAGCTCCCTCCATCACCATTTCCCACAATCACAACCTTCCCCATCTCCCTCACACCTCAATATGTCTCTCAATTGCCTTCCATATCCCTACTTGGGTTCGGGTTCGGGTTCAGGGTCAGGTTCGCCTCCGCCATCGTCGCCACCGCTCCGCGAGGCTCTACCGCTTCTCGGGTTGATATCTCCCCCCGAGCAACGGCAGGAGCAAGAGGAAGAAGACGATGGCGGAGACGACGAGGGCAACGATGAGTCGGTGACCGTGGCACTCCACATAGGGCTACCTAGCCCTAGCACAGTGGAGATGGGTTCATCTGAGATTGATCATAGTAATAATAATGATAATCTTGATGATTTTGGGCAGTCCACCAAAACCCTAATAAAGGGGCAGTACTGGATCCCTACTCCTACTCAAATCCTCATTGGTCCTACACAATTCTCTTGCCCTGTTTGCTTCAAAACCTTCAATAGATACAACAATATGCAGATGCACATGTGGGGGCACGGCTCTCAGTACAGAAAAGGCCCAGAATCCCTGCGAGGCACGCAGCCAACGGGCATGCTAAGGCTACCTTGCTACTGCTGCGCGCCAGGGTGCCGCAACAACATCGACCACCCTCGAGCCAAGCCACTCAAAGACTTTAGAACTCTCCAAACACACTACAAGCGCAAGCACGGGCTCAAGCCATTTACGTGCCGCAAGTGCGGTAAGGCATTCGCCGTGCGAGGAGACTGGCGAACTCATGAGAAGAATTGTGGAAAGCTTTGGTATTGCATTTGTGGCTCGGATTTCAAGCACAAGCGCTCGCTCAAGGACCATGTCAAGGCCTTCGGTAACGACCATGCCGCCTACGGTGTCGGCGGGGTCGACGGGTTCGGAGACGAGGAGGAGGACGACCCCGCTTCGGAAGTCGAGCAGGATAACAACGAGTGA 972 53.29 MADPYSNSLASLLKFSSLHHHFPQSQPSPSPSHLNMSLNCLPYPYLGSGSGSGSGSPPPSSPPLREALPLLGLISPPEQRQEQEEEDDGGDDEGNDESVTVALHIGLPSPSTVEMGSSEIDHSNNNDNLDDFGQSTKTLIKGQYWIPTPTQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGLKPFTCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHVKAFGNDHAAYGVGGVDGFGDEEEDDPASEVEQDNNE 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7736991 7739246 - Carg12724-RA Car07g01248 152482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01248 323 MobiDBLite consensus disorder prediction 301 323 - -
Car07g01248 323 MobiDBLite consensus disorder prediction 304 323 - -
Car07g01248 323 MobiDBLite consensus disorder prediction 20 67 - -
Car07g01248 323 MobiDBLite consensus disorder prediction 81 95 - -
Car07g01248 323 MobiDBLite consensus disorder prediction 20 37 - -
Car07g01248 323 ProSitePatterns Zinc finger C2H2 type domain signature. 161 181 IPR013087 -
Car07g01248 323 MobiDBLite consensus disorder prediction 111 128 - -
Car07g01248 323 MobiDBLite consensus disorder prediction 108 128 - -
Car07g01248 323 ProSiteProfiles Zinc finger C2H2 type domain profile. 159 186 IPR013087 -
Car07g01248 323 MobiDBLite consensus disorder prediction 78 97 - -
Car07g01248 323 ProSiteProfiles Zinc finger C2H2 type domain profile. 243 263 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01957 Car-Chr4:13407527 Car07g01248 Car-Chr7:7736991 9.60E-106 dispersed
Car07g01248 Car-Chr7:7736991 Car20g00061 Car-Chr20:336849 9.43E-129 dispersed
Car03g00088 Car-Chr3:1119536 Car07g01248 Car-Chr7:7736991 7.76E-160 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3914 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01248 - - bhj:120074233 491.5