Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car07g01248 | ATGGCTGACCCATATTCCAATTCATTAGCTAGTCTTCTAAAATTCAGCTCCCTCCATCACCATTTCCCACAATCACAACCTTCCCCATCTCCCTCACACCTCAATATGTCTCTCAATTGCCTTCCATATCCCTACTTGGGTTCGGGTTCGGGTTCAGGGTCAGGTTCGCCTCCGCCATCGTCGCCACCGCTCCGCGAGGCTCTACCGCTTCTCGGGTTGATATCTCCCCCCGAGCAACGGCAGGAGCAAGAGGAAGAAGACGATGGCGGAGACGACGAGGGCAACGATGAGTCGGTGACCGTGGCACTCCACATAGGGCTACCTAGCCCTAGCACAGTGGAGATGGGTTCATCTGAGATTGATCATAGTAATAATAATGATAATCTTGATGATTTTGGGCAGTCCACCAAAACCCTAATAAAGGGGCAGTACTGGATCCCTACTCCTACTCAAATCCTCATTGGTCCTACACAATTCTCTTGCCCTGTTTGCTTCAAAACCTTCAATAGATACAACAATATGCAGATGCACATGTGGGGGCACGGCTCTCAGTACAGAAAAGGCCCAGAATCCCTGCGAGGCACGCAGCCAACGGGCATGCTAAGGCTACCTTGCTACTGCTGCGCGCCAGGGTGCCGCAACAACATCGACCACCCTCGAGCCAAGCCACTCAAAGACTTTAGAACTCTCCAAACACACTACAAGCGCAAGCACGGGCTCAAGCCATTTACGTGCCGCAAGTGCGGTAAGGCATTCGCCGTGCGAGGAGACTGGCGAACTCATGAGAAGAATTGTGGAAAGCTTTGGTATTGCATTTGTGGCTCGGATTTCAAGCACAAGCGCTCGCTCAAGGACCATGTCAAGGCCTTCGGTAACGACCATGCCGCCTACGGTGTCGGCGGGGTCGACGGGTTCGGAGACGAGGAGGAGGACGACCCCGCTTCGGAAGTCGAGCAGGATAACAACGAGTGA | 972 | 53.29 | MADPYSNSLASLLKFSSLHHHFPQSQPSPSPSHLNMSLNCLPYPYLGSGSGSGSGSPPPSSPPLREALPLLGLISPPEQRQEQEEEDDGGDDEGNDESVTVALHIGLPSPSTVEMGSSEIDHSNNNDNLDDFGQSTKTLIKGQYWIPTPTQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGLKPFTCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHVKAFGNDHAAYGVGGVDGFGDEEEDDPASEVEQDNNE | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7736991 | 7739246 | - | Carg12724-RA | Car07g01248 | 152482 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car07g01248 | 323 | MobiDBLite | consensus disorder prediction | 301 | 323 | - | - | |
Car07g01248 | 323 | MobiDBLite | consensus disorder prediction | 304 | 323 | - | - | |
Car07g01248 | 323 | MobiDBLite | consensus disorder prediction | 20 | 67 | - | - | |
Car07g01248 | 323 | MobiDBLite | consensus disorder prediction | 81 | 95 | - | - | |
Car07g01248 | 323 | MobiDBLite | consensus disorder prediction | 20 | 37 | - | - | |
Car07g01248 | 323 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 161 | 181 | IPR013087 | - | |
Car07g01248 | 323 | MobiDBLite | consensus disorder prediction | 111 | 128 | - | - | |
Car07g01248 | 323 | MobiDBLite | consensus disorder prediction | 108 | 128 | - | - | |
Car07g01248 | 323 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 159 | 186 | IPR013087 | - | |
Car07g01248 | 323 | MobiDBLite | consensus disorder prediction | 78 | 97 | - | - | |
Car07g01248 | 323 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 243 | 263 | IPR013087 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car04g01957 | Car-Chr4:13407527 | Car07g01248 | Car-Chr7:7736991 | 9.60E-106 | dispersed | |
Car07g01248 | Car-Chr7:7736991 | Car20g00061 | Car-Chr20:336849 | 9.43E-129 | dispersed | |
Car03g00088 | Car-Chr3:1119536 | Car07g01248 | Car-Chr7:7736991 | 7.76E-160 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3914 | None | None | None | None | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car07g01248 | - | - | bhj:120074233 | 491.5 |