Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01251 ATGGCGTCTCCTTTCAGACCGCCATTGTTGATATCCTTAGCCTTTGCTTTCTTCCTTTTGGGTTCTTCTTCGTCTGAGGAATCGACCCTTTTGGCCTTCAAATCTTCCATTGATGATTTGACGAACTCTCTCTCGAACTGGGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCCGATCCATTTCTGTAACTGGACTGGGATTTCTTGTGTGAGTTCGTCCTCGCCTTCTTCGCTTTCGGTTTCCGCCATTAATCTTCAGGGTTTGAATCTCTCCGGCGAAATTTCATCTTCCATTTGTGAGCTCCCTCGTTTGGTTCATCTTAATCTTGCGGATAATCAGTTCAATCAGCCGATTCCTCTTCATCTCTCGCAGTGCAGTTCGTTGGAGAGTTTGAATCTGAGTAACAATCTCATTTGGGGGACGATCCCCGATCAGATTTCTCTGTTTCGTTCTTTGATTGTTCTTGATTTTGCGAAGAATCATATCGAGGGGAAAATCCCTGAGGGCATTGGGGCTTTGAAGAATCTTCAAGTTCTGAATCTAAGAAGCAACTTGATTTCTGGTAGAGTTCCTTCTGTTATCTTTCATAATCTTACTGAACTTACTGTTCTTGATTTGTCTGAAAATTCTTATCTGATGAGTGATATTCCTAATGAGATTGGGAAGCTTGTGAAGCTTCAAGAGCTATGGCTTCAAAGCTCTGGTTTCCATGGCGAAATCCCTACTTCTTTGTTGGATTTGAGTAGTTTATCTGTTTTAGATCTTTCTCAGAACAATCTCACTGGAAAACTCCCTGACATGATGGGTTCTTCTCTGAATAATTTGGTGTTCTTTGATGTTTCTTTGAATAAGCTCATGGGATCTTTCCCAGATGGTTTTTGTAGTGGAAAATCTCTTGTGAGTCTTAGTGTTCATACCAATTTTTTCACTGGAACCTTGCCTGATTCCTTGAATAAATGCTTGAATCTTGAGAGATTTGAAGTTCAGAACAATGGGTTTTCGGGGGATTTTCCTAAATCATTATGGTCATTGCCTAAGATTAAGCTCATTAGAGCTGAAAACAATGGTTTCTCTGGTGAAATTCCTGAATCTATATCAATGGCTGCTCATCTTGAGCAAGTTCAGCTTGATAACAATAGTTTTTCGAGTAAGATACCTCGAGGACTCGGGTCGATTCGGAGCTTATACAGATTCTCTGCGTCGCTCAACCTTTTTTATGGTGAATTGCCATTGAACTTCTGTGATTCGCCATTGATGAGTATCATTAATCTGTCCCGTAATTCTCTTTCGGGACGGATTCCCGAGCTGAAGAACTGCAAGAAACTTGTCTCTTTGTCCTTAGCAGGCAATAGTTTTACTGGAGTAATACCTACTTCCCTTGCTGATCTACCTGTATTAACTTATCTTGATCTTTCTGATAACAATCTCACTGGTTCGATCCCTCGAGGACTCGAAAACTTAAAGCTTGCGCTGTTTAACGTTTCGTTCAATCAACTATCGGGTGCTGTTCCGTTCTCTTTGATTTCGGGGCTACCTGCTTTGTTTCTGCAAGGAAATCCTGATCTTTGTGGCCCTGGTTTGCAAACTCCATGTTCTCAAGGCCATCCAACAAACCATGTGTCTGGACTTAAGAAAATGACATGTGCTCTCATCTCTATAGCTTGTGTTCTAGGAGTTATGAGCTTAGCTGCTGGTTTCTTTCTGTATTACCGGTCATTCAAGTCGAAATCCCGTGTCGATAACTGGCACTCGGTCTACTTTTACCCTCTTAGAATCAGTGAACATGAGTTGATCATGGGTATGAATGAGAAAACTGCACAAGGACATGGAGGAGCTTTTGGCCGAGTGTTCGTTTTAAGCTTGCCGAGCCGTGAACTGATTGTCGTTAAGAAACTGGTTAACTTTGGGAGTCGTTCGTGGAAATCGTTGAAAGCCGAGGTCGAGACGTTGGCCAAGATCAGGCACAAGAACATCATCAAAATTCTGGGGTTTTGCTACTCTGATGATGCCATTTTTCTGATCTATGAATTCTTACACAAAAAAAGCTTGGCTGACTTGATTTGCAGAAATGATTCTTGTCTGAATTGGAATGTGAGACTGAGAATCGCCATTGAGGTTGCTCAAGGACTAGCTTACCTTCACAAGGACTGTGTCCCTCATTTACTTCATCGAAACGTCAAATCGTCGAACATTCTATTGGATGCTGACTTTGTCCCGAAGCTCACGGATTTCGCTCTTCACCAGATCGTTGGAGAATCGGCATTTCACTCGACTGTGGCTTCGGAATCTGCTCATTCCTGCTATATTGCACCAGAGTATAAATACAACAAAAAAGCGACAGAGCAAATGGATGTGTACAGCTTTGGTGTCGTGTTGCTAGAACTGGTGACCGGGAGACAAGCCGAGCGATCGGAATCGACCGACTCTCTCGATGTCGTCCAGTGGGTTAGAAGGAAGGTGAACATAGCCAATGGAGCTTCCCAAGTCCTGGACCCGAGCGTGTCGGAGCAATCCCAACGAGAGATGCTGGAAGCTCTAGACATTGCCCTTCAATGCACTTCCATGATGCCCGAAAAACGACCATCAATGCTGGAAGTCGCCAAGGCTCTTCAACTGATCGACACGACGACAAACCTCCATGACGTAGCCTCCTCGGCTGCGGAGGATGAATCAGTTTCGAGCTGA 2688 43.45 MASPFRPPLLISLAFAFFLLGSSSSEESTLLAFKSSIDDLTNSLSNWVSSSSSSSSSSPIHFCNWTGISCVSSSSPSSLSVSAINLQGLNLSGEISSSICELPRLVHLNLADNQFNQPIPLHLSQCSSLESLNLSNNLIWGTIPDQISLFRSLIVLDFAKNHIEGKIPEGIGALKNLQVLNLRSNLISGRVPSVIFHNLTELTVLDLSENSYLMSDIPNEIGKLVKLQELWLQSSGFHGEIPTSLLDLSSLSVLDLSQNNLTGKLPDMMGSSLNNLVFFDVSLNKLMGSFPDGFCSGKSLVSLSVHTNFFTGTLPDSLNKCLNLERFEVQNNGFSGDFPKSLWSLPKIKLIRAENNGFSGEIPESISMAAHLEQVQLDNNSFSSKIPRGLGSIRSLYRFSASLNLFYGELPLNFCDSPLMSIINLSRNSLSGRIPELKNCKKLVSLSLAGNSFTGVIPTSLADLPVLTYLDLSDNNLTGSIPRGLENLKLALFNVSFNQLSGAVPFSLISGLPALFLQGNPDLCGPGLQTPCSQGHPTNHVSGLKKMTCALISIACVLGVMSLAAGFFLYYRSFKSKSRVDNWHSVYFYPLRISEHELIMGMNEKTAQGHGGAFGRVFVLSLPSRELIVVKKLVNFGSRSWKSLKAEVETLAKIRHKNIIKILGFCYSDDAIFLIYEFLHKKSLADLICRNDSCLNWNVRLRIAIEVAQGLAYLHKDCVPHLLHRNVKSSNILLDADFVPKLTDFALHQIVGESAFHSTVASESAHSCYIAPEYKYNKKATEQMDVYSFGVVLLELVTGRQAERSESTDSLDVVQWVRRKVNIANGASQVLDPSVSEQSQREMLEALDIALQCTSMMPEKRPSMLEVAKALQLIDTTTNLHDVASSAAEDESVSS 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7767423 7770426 + Carg12727-RA Car07g01251 152485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01251 895 Pfam Leucine rich repeat 442 500 IPR001611 GO:0005515
Car07g01251 895 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Car07g01251 895 Pfam Protein kinase domain 612 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01251 895 Pfam Leucine rich repeat N-terminal domain 25 70 IPR013210 -
Car07g01251 895 ProSiteProfiles Leucine-rich repeat profile. 128 150 IPR001611 GO:0005515
Car07g01251 895 ProSiteProfiles Protein kinase domain profile. 603 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01251 895 ProSiteProfiles Leucine-rich repeat profile. 466 489 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01251 Car-Chr7:7767423 Car16g00765 Car-Chr16:4852458 1.01E-152 dispersed
Car03g00082 Car-Chr3:1047581 Car07g01251 Car-Chr7:7767423 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89019 PF00069 Pkinase 1.20E-37 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01251 - - csv:101222175 1458.35