Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01258 ATGCCCTCCTCCTCATTTCTCTCCTTCCTCACCTTCTTCTCCTTCCTCATTTCCCTCTCTTCCTCTCTCAACTCCGATGGCCTCTCCCTTCTCGCCCTCAAGGCCGCCATTGAAACCGACCCATCTCACCTCCTCGCCTCATGGTCCGACTCCGACTCCACCCCATGCCACTGGCCTGGAATCCTCTGCACCCGCGACCGAGTCACCCACCTCTCTCTTACCAACAAAGGCCTCACCGGCTACATCCCTTCCGAGCTCGGCCTCCTCGATTCCCTCCAGCGCCTCAGCCTCGCTTTCAACAATTTCTCTAAACCGATTCCGGTTCATCTCTACAACGCCACCAACCTCATCTTCCTCGACCTCTCTCACAACTCCCTCTCCGGTCCGGTTTCGGATCAAATCGGCGAACTCAGGAATCTCCGGCATCTCGATTTATCCTCTAATTCCCTCAATGGGTCTCTCCCGAAGCGGCTGACGGAGTTGACCGAACTTGTCGGGACTCTCAATTTGTCCTTCAATCAATTCTCCGGCGAGGTTCCGCCGTCGTTTGGGAACCTCCCGCTGATTGTGAATCTCGATGTTCGTCACAATAATCTCACCGGAAAGATTCCGCAGGTGGGTTCGCTGTTGAATCAAGGCCCGACGGCTTTCTCCGGCAACCCAAGTCTTTGCGGGTTTCCGTTACAGACGCTATGTCCAGAAGCTCAGAACCCGAATGTTATCCCTGAGAATCCGCAGAATCCGAAGTCGTTGAACGGTAATTTTCAAGGATACGGCGGAGGGAGAGCTACAAGGGGGAGTGGCGCCGCTGCGACGGTGGCAGTGGTGTCATCAATATTCGCGGTGATGGGGGTTGTGTCGCTGACGGTGTGGTGGTTCCGGAGGAAGGCGGAAGTGGGGAAGCGAGATGAGGGCAAATCGGGAAAAGGGAGTCCGGAGGATAACAGTGAAGGGGATTTGGAAGGGCAAGATGGTAAATTCGTAGTGATCGATGAAGGGATGAATTTGGAATTAGAGGATTTGTTGAGGGCATCGGCGTACGTGGTGGGGAAGAGTAGGAGTGGGATAGTGTATAAGGTCGTGGCTGGGCGGGGATCAGGTGCGGCCGCGAGTATTGTAGCTGTAAGGAGACTTAACGATGGTGATGCCACGTTGACGTTCAAAGATTTTGAGTATGAGATGGAGTCCATCAGTAGGGTTCACCATCCCAACATCCTACGGTTGAGAGCTCATTACTATGCAAGTGATGAGAAATTGGTGGTCACTGATTTCATCAACAATGGAAGCTTGCACTCTGCCTTACATGGAGGAGGCCCCTCCAGTTCTCTGTCACCTCTGCCATGGTCTACAAGGTTAAAAATTGCCCAAGGAGCTGCAAGGGGTTTGGCATATATTCATGAATTTGGTGCTCGGAAGTACGTACACGGAAACGTAAAATCGACGAAGATTCTTCTCGATGACGATCTCGAGCCTTACGTTTCAGGTTTCGGACTCGCTCGTCTCAGCCAAGGAACATCCAAAAAGTTGAGCTCAAGCCAGAATATGATCACCACCTCAATCATGGGGCCAAGCATGACAACCCCCTCAGCAATGTACTTAGCGCCAGAGGTTCGTGAGTTTGGAGGGAAGTACACTCAGAAATGCGATGTCTATTCATTTGGTATTGTCCTCCTTGAGCTTTTGAGCGGTCGATTACCTAATGCAGGCTCGGAGACTGATGGGGGGAAGGGGTTGGAATGTTTTGTGAGGAAGGCATTTCAAGAAGAGCGCCCCTTGACCGAGATTATAGACCCGGCACTCGTGCCGGAGATTTATGCCAAGAAACAAGTGGTTTCGACATTTCACATTGCGCTGAATTGCACAGAGCTTGATCCCGAGCTTCGTCCTCGAATGCGATCGGTTTCTGAGAATCTCGATCGAATCAAATTTCAATAA 1935 51.89 MPSSSFLSFLTFFSFLISLSSSLNSDGLSLLALKAAIETDPSHLLASWSDSDSTPCHWPGILCTRDRVTHLSLTNKGLTGYIPSELGLLDSLQRLSLAFNNFSKPIPVHLYNATNLIFLDLSHNSLSGPVSDQIGELRNLRHLDLSSNSLNGSLPKRLTELTELVGTLNLSFNQFSGEVPPSFGNLPLIVNLDVRHNNLTGKIPQVGSLLNQGPTAFSGNPSLCGFPLQTLCPEAQNPNVIPENPQNPKSLNGNFQGYGGGRATRGSGAAATVAVVSSIFAVMGVVSLTVWWFRRKAEVGKRDEGKSGKGSPEDNSEGDLEGQDGKFVVIDEGMNLELEDLLRASAYVVGKSRSGIVYKVVAGRGSGAAASIVAVRRLNDGDATLTFKDFEYEMESISRVHHPNILRLRAHYYASDEKLVVTDFINNGSLHSALHGGGPSSSLSPLPWSTRLKIAQGAARGLAYIHEFGARKYVHGNVKSTKILLDDDLEPYVSGFGLARLSQGTSKKLSSSQNMITTSIMGPSMTTPSAMYLAPEVREFGGKYTQKCDVYSFGIVLLELLSGRLPNAGSETDGGKGLECFVRKAFQEERPLTEIIDPALVPEIYAKKQVVSTFHIALNCTELDPELRPRMRSVSENLDRIKFQ 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7806626 7810495 + Carg12734-RA Car07g01258 152492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01258 644 ProSiteProfiles Protein kinase domain profile. 343 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01258 644 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Car07g01258 644 MobiDBLite consensus disorder prediction 301 322 - -
Car07g01258 644 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Car07g01258 644 Pfam Protein tyrosine and serine/threonine kinase 349 638 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01258 Car-Chr7:7806626 Car18g00653 Car-Chr18:7798146 3.71E-172 dispersed
Car20g00831 Car-Chr20:5532013 Car07g01258 Car-Chr7:7806626 6.13E-88 dispersed
Car03g00075 Car-Chr3:957315 Car07g01258 Car-Chr7:7806626 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89020 PF07714 PK_Tyr_Ser-Thr 2.50E-27 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01258 - - csv:101212426 992.26