Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01266 ATGATACGATCGTCTTTCTTTCTAACCGCTTTTCTCATTTGTTGGCATTGCAGAAATGATGAAGCCCGCCAGCCTCTTTCGAGGAAGGTTTCTATTCCGTCCTCTAGGATTAACCCTTATAGGATGGTCATAGTTCTGCGACTTGTTATTCTTTGCATCTTCTTGCACTACCGGATTACAAATCCAGTACCGAATGCCTTTGCTCTGTGGTTAATATCAGTGATTTGTGAAATATGGTTTGCTGTATCTTGGATTTTGGATCAGTTCCCCAAATGGCTTCCAGTCAATCGCGAGACATATCTTGATCGACTTGCTCTACGATATGATCGTGAAGGAGAGCCATCCCAGTTGGCTGCTGTTGACATATTTGTCAGTACTGTCGACCCTCTGAAAGAGCCTCCCCTTGTCACAGCTAATACGGTCCTATCAATTCTCGCTGTGGACTATCCAGTCGATAAAGTTTCTTGCTATGTATCAGATGATGGAGCTGCTATGTTAACATTTGAAGCATTGTCTGAAACGTCAGAATTTGCAAGAAAATGGGTTCCTTTCTGCAAGAAATACAGCATTGAGCCACGAGCACCAGAGTGGTATTTTGCTCAGAAGATCGATTACTTAAAGGACAAGGTTCACCCATCGTTTGTGAAGGAGCGGCGAGCAATGAAGAGAGAATATGAGGAGTTTAAAATTCGTGTCAATGGACTTGTTGCTAAGGCACAGAAAGTTCCTGATGAAGGGTGGGTCATGCAAGATGGTACACCATGGCCTGGAAACAACACTAGAGATCATCCAGGAATGATTCAGGTTTTCTTAGGGCACAGTGGAGGACTTGATACTGAGGGTAATGAGCTTCCTCGTTTAGTTTATGTTTCTCGTGAGAAGCGTCCTGGTTTCCAACATCACAAAAAGGCTGGTGCTATGAATGCACTTGTTCGTGTTTCTGCTGTTCTTACCAATGGACCTTTCTTGTTAAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCGTTACGGGAAGCTATGTGCTTTATGATGGATCCTAATCTTGGAAAATCAGTGTGCTACGTTCAGTTTCCTCAGAGGTTTGATGGGATTGATAGAAACGATCGATACGCCAATCGTAACACTGTTTTCTTTGATATCAATCTTCGAGGCTTGGATGGCATCCAAGGTCCGGTTTACGTGGGAACGGGATGTGTCTTCAATCGAACTGCATTGTACGGCTATGAACCCCCCCTCAAGCCTAAGCACAAAAAACCCGGGGTCTTCTCCAGTTGCTTTGGGAAATCGAAAAAGAAAAGTTCTAAATCTAAAAGGAAGGATTCTGATAAAAAGCAATCAAATAAAAACGTCGATCCCACTGTGCCGATATTCAACCTCGAGGATATCGAGGAAGGTGTCGAAGGTGCTGGATTTGACGATGAGAAGTCGCTACTAATGTCACAAATGAGCCTGGAGAAGAGGTTTGGTCAATCAGCTGTATTTGTTGCTTCCACACTGATGGAGAACGGTGGCGTGCCGCAGTCTGCCACCCCGGAATCTCTTCTTAAGGAAGCAATTCACGTCATCAGTTGCGGATACGAGGATAAAACAGACTGGGGAAGTGAAATTGGATGGATCTATGGTTCTGTCACAGAAGATATTTTGACAGGGTTCAAGATGCACGCCCGTGGTTGGAGATCGATCTATTGCATACCTGACCGTCCTGCATTTAAAGGTTCTGCTCCTATTAATCTTTCCGATCGTCTAAACCAAGTGCTTCGATGGGCGCTAGGTTCGGTCGAAATTCTTTTCAGTCGGCATTGCCCAATGTGGTACGGTTATAGTGGACGCCTGAAATGGCTCGAGAGATTTGCTTATGTTAACACCACCATTTACCCAATTACATCCATTCCTCTCCTTGCCTATTGTACCTTGCCTGCAATATGTCTGCTCACCGGAAAGTTCATCATTCCTCAGATTAGTAATCTTGCCAGTATTTGGTTCATTTCTCTCTTTCTTTCCATCTTTGCCACTGGTATTCTGGAAATGAGATGGAGTGGCGTCGGAATCGATGAATGGTGGAGAAACGAGCAGTTTTGGGTTATCGGAGGTGTGTCGGCCCATCTGTTTGCCGTGTTCCAAGGTCTGCTTAAAGTTCTTGCTGGAATTGATACGAACTTCACGGTTACTTCGAAAGCATCGGACGAAGATGGAGATTTTGCTGAGCTCTACATGTTCAAATGGACCACTCTTCTCATTCCCCCAACTACTCTCCTCATTATCAACATAGTTGGTGTTGTTGCTGGAATTTCTTACGCCATTAACAGTGGCTATCAATCCTGGGGTCCCCTTTTCGGCAAGCTGTTCTTCGCTTTCTGGGTGATTATTCATCTGTATCCCTTCCTCAAGGGTCTGATGGGTCGCCAGAACCGAACTCCGACGATCGTGGTTGTATGGTCCATCCTCCTTGCCTCAATCTTCTCCCTTTTATGGGTTCGGATTGATCCCTTCACAACCCGAGTAACTGGCCCCGACGTCGAACAGTGTGGAATCAACTGCTAA 2547 44.88 MIRSSFFLTAFLICWHCRNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVPNAFALWLISVICEIWFAVSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKERRAMKREYEEFKIRVNGLVAKAQKVPDEGWVMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGVFSSCFGKSKKKSSKSKRKDSDKKQSNKNVDPTVPIFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPDRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPMWYGYSGRLKWLERFAYVNTTIYPITSIPLLAYCTLPAICLLTGKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINIVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7873365 7878693 + Carg12742-RA Car07g01266 152500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01266 848 MobiDBLite consensus disorder prediction 421 454 - -
Car07g01266 848 Pfam Cellulose synthase 120 841 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01266 Car-Chr7:7873365 Car10g00420 Car-Chr10:2110337 0 dispersed
Car03g00067 Car-Chr3:811642 Car07g01266 Car-Chr7:7873365 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01266 K10999 - csv:101211779 1662.89