Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01271 ATGGCCTCTTTGTGTTGTTATCTCTTCATTTTTCTTGTTGGGTTTCTTTCAAATTCCCTGTTTCTGGGAGCTGAGCTTGATGATCAAATCATCATGTCCTCTATTAGAGAGGACCTTCAAGTTCCTGGATGGAGCTCAAACATCTCAGATTACTGTTCTTGGAAAGGTGTTCGTTGTGGTTTGAACCATTCCATGGTTGAAGCTCTTGATCTTTCTGGTCACTCTCTTAGAGGTAATCTAACTGTGATTTCTCAGCTCAAGGCTCTGAAATGGCTGGATCTTTCCTTCAATGACTTCCATGGAAAGATTCCATCGAGTTTTGCTAACTTATTCGAGCTCGAATTCCTCGATTTGTCTTTGAACAAGTTCGATGGCTCGATCCCGCCCGAGCTTGGTGGTTTGAAGAACCTCAAGTCATTGAATCTCTCCAATAATCTACTGGTGGGAGAGATTCCAGATGAGCTTCAAGGCTTAGAGAATTTGAGGGATTTTCAAGTTTCTAGCAACAGATTGAATGGTTCAATCCCAATGTGGGTTGGGAATTTCACTCATCTTAGAGTTTTTACAGCTTATGAGAATGCATTTGATGGTGTAATCCCTGATAATCTAGGCTTGGTTTCTGAACTTCAAGTGTTGAATCTGCATACCAATAAGCTCGAAGGCCCGATTCCTCGAAGCGTTTTCGCTTCAGGGAAGCTCGAGATTTTGGTTCTAACACAAAACAGATTGAATGGGAATCTTCCTGAAGAGATTGGGAACTGTAAAAGCCTTACTAGCGTTCGAATTGGGAACAACGACCTTGTTGGTGTCGTTCCTCCTGCCATTGGAAATGTTAGTAGCCTTGCTTACTTTGAAGTGAATAACAATCACCTTTCGGGCGATATAACGTCTCGGATATCGCTGTGCTCTAATCTTACTTTGCTGAATCTAGCCTCGAATGGATTCACCGGGACGATTCCTTCCGAGCTTGGAGAACTGATGAATCTGCAGGAACTTATTCTTTCTGGTAACAATCTGTATGGTGATATTCCAAGATCAATGCTCAAGTGTAAGAATCTCAACAAGCTTGATTTGAGCAACAATAGATTTAATGGTACTATTCCTTCAGATATCTGCAATGTATCAAGATTGCAGTACTTGCTTTTGGAACAGAATTCAATCAAAGGAGAGATACCTAACGAGATCGGAAAATGTACAAAGCTTCTCGACCTCCGTCTCGGAAGTAACTACTTAACTGGAAGCATCCCTTCGGAGATCGGTCGGATTAAGAATTTACAGATAGCTTTGAACTTGAGTTTCAACCATCTAAATGGACCGGTGCCTCCTGAGTTGGGGAAGCTTGATAAACTGGTCTCGTTAGATTTGTCGAACAATCATCTCTCGGGCGATATCCCTTCCGAACTCAAGGGCATGTTAAGCTTGATAGAGGTGAATTTTTCGAATAATCTGCTTACTGGTTCGATTCCTTTTTTTGTTCCATTCCAGAAAAGTGCAAATTCTAGTTTTCTAGGGAACGATGGGCTTTGCGGGGCGCCATTAAGCATTTCGTGTAAAAACTCGATCGGGTCGTACAATCAAGATTACCATCACAAGGTCTCTTACAAGATCATACTGGCTGTTATCGGTTCTGGGCTGGCAGTCTTCGTATCAGTAACTATAGTTGTTTTACTTTTCGTAATGAAAGAAAAGCAGGAAAAGACAGCTAAGTCTTCAGGGATTGCAGATGATGCAACCGTCGACGATCAACCGATTATAATATCAGGAAACGTCTTCGATGATAATCTCCGACAGGAAATAGATCTCGATGCAGTCGTTAAAGCCACGTTGAAGGATTCAAACAAGCTTATCTTTGGCACTTTCAGCACGGTTTACAAGGCGGTTATGCCTTCGGGTATGATCATATCAGTTAAGAGACTAAAATCCATGGATAAGACAATCATTCATCATCAAAGCAAGATGATCAGAGAGCTTGAAAGGCTTGGTAAACTGAGTCATGCTAATCTTTTGCAGCTCATTGGATATGTAATATATGAAGATGTGGCTCTGTTGCTTCATCATTATCTACCCAATGGGACATTGGCTCAGCTGCTTCATGAGTCCACAAAACAACCTGAGTATCAACCCGATTGGCCTACAAGATTTTCGATAGCCATTGGAGCAGCAGAAGGGCTTGCTTTTCTTCATCATGTGGCTATAATTCATCTTGATATTTCATCATCTAATGTTCTTTTAGATGCAAACTTCAAACCTTTGGTTGGAGAGGTTGAGATCTCAAAGCTTCTTGATCCATCAAGAGGAACTGCTAGTATTAGTGCAGTGGCTGGTTCATTTGGCTATATTCCACCAGAATATGCGTACACGATGCAAGTTACGGCACCTGGAAACGTTTATAGCTACGGTGTTATCTTGCTTGAGATCCTCACTACCAGACTTCCAGTTGATGAGGAGTTTGGTGAAGGAGTAGACTTGGTGAAGTGGGTGCACGGTGCTTCGTCGAGAGGCGAAACGCCTGAACAGATACTTGATTCCCAGCTGAGCACGGTGTCGTTTGGATGGAGGAAGGAGATGCTTGCAGCTCTCAAGATTGCATTGCTATGCACTGATAGCATTCCGGCCAAAAGGCCAAAAATGAAGGTGGTGGTGGAAATGCTTATGGAGATCAAGCAAAATTGA 2673 42.35 MASLCCYLFIFLVGFLSNSLFLGAELDDQIIMSSIREDLQVPGWSSNISDYCSWKGVRCGLNHSMVEALDLSGHSLRGNLTVISQLKALKWLDLSFNDFHGKIPSSFANLFELEFLDLSLNKFDGSIPPELGGLKNLKSLNLSNNLLVGEIPDELQGLENLRDFQVSSNRLNGSIPMWVGNFTHLRVFTAYENAFDGVIPDNLGLVSELQVLNLHTNKLEGPIPRSVFASGKLEILVLTQNRLNGNLPEEIGNCKSLTSVRIGNNDLVGVVPPAIGNVSSLAYFEVNNNHLSGDITSRISLCSNLTLLNLASNGFTGTIPSELGELMNLQELILSGNNLYGDIPRSMLKCKNLNKLDLSNNRFNGTIPSDICNVSRLQYLLLEQNSIKGEIPNEIGKCTKLLDLRLGSNYLTGSIPSEIGRIKNLQIALNLSFNHLNGPVPPELGKLDKLVSLDLSNNHLSGDIPSELKGMLSLIEVNFSNNLLTGSIPFFVPFQKSANSSFLGNDGLCGAPLSISCKNSIGSYNQDYHHKVSYKIILAVIGSGLAVFVSVTIVVLLFVMKEKQEKTAKSSGIADDATVDDQPIIISGNVFDDNLRQEIDLDAVVKATLKDSNKLIFGTFSTVYKAVMPSGMIISVKRLKSMDKTIIHHQSKMIRELERLGKLSHANLLQLIGYVIYEDVALLLHHYLPNGTLAQLLHESTKQPEYQPDWPTRFSIAIGAAEGLAFLHHVAIIHLDISSSNVLLDANFKPLVGEVEISKLLDPSRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVILLEILTTRLPVDEEFGEGVDLVKWVHGASSRGETPEQILDSQLSTVSFGWRKEMLAALKIALLCTDSIPAKRPKMKVVVEMLMEIKQN 890
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7892897 7895895 - Carg12747-RA Car07g01271 152505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01271 890 Pfam Leucine Rich Repeat 89 110 IPR001611 GO:0005515
Car07g01271 890 Pfam Leucine Rich Repeat 449 470 IPR001611 GO:0005515
Car07g01271 890 Pfam Leucine rich repeat 132 171 IPR001611 GO:0005515
Car07g01271 890 Pfam Leucine rich repeat 328 387 IPR001611 GO:0005515
Car07g01271 890 Pfam Protein kinase domain 613 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01271 890 ProSiteProfiles Protein kinase domain profile. 609 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01271 890 ProSitePatterns Tyrosine protein kinases specific active-site signature. 732 744 IPR008266 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car03g00061 Car07g01271 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g01271 Car-Chr7:7892897 Car06g01091 Car-Chr6:8200827 2.63E-65 dispersed
Car01g00836 Car-Chr1:6584716 Car07g01271 Car-Chr7:7892897 4.85E-114 transposed
Car03g00061 Car-Chr3:790476 Car07g01271 Car-Chr7:7892897 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89022 PF00069 Pkinase 1.40E-26 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01271 - - csv:101215786 1579.69