Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01293 ATGGCGGAGTACGATCTAACTCGGCGAATCGCTCCAAATTTGGACCGTCATCTTGTTTTCCCTCTCCTCGAGTTCCTTCAAGAGAGGCAGTTTTACCCTGACGAGCAGATCCTCAAGGCCAAAATCGAGCTTCTCAACAGGACCAATATGGTTGATTACGCCATGGACATTCACAAGTCGCTGTATCACACCGACGATGTTCCTCAAGGCATGGCCATCTCTTGGGTGGAAGTGGTGGCGAGGCTTAAGGCTTTGGAGGAGTCCGCGGCGCCACTTGTTGCTTTTCTGCAGAATCCGGCTGCTGTTCAGGAACTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGATTGGTCCAGATCAAATAGAAGCGTTATACCAATATGCCAAATTTCAGTTCGAGTGTGGGAACTACTCTGGTGCTGCTGACTATCTCTATCAGTACAGAGCCTTATGCACAGACAGTGAAAGGAGCTTGAGTGCTCTATGGGGAAAATTGGCAGCTGAAATTTTAATGCAGAATTGGGATATTGCTGTTGAGGAGCTTAATCGTTTGAAAGAGATTATCGACTCTAAGAATTTCTCATCACCGATGAAACAAGTGCAAGGCAGAATATGGTTGATGCATTGGAGCCTCTTCATATTTTTCAATCACGACAATGGAAGAACACAGATAATTGACCTGTTTAATCAAGATAAGTATTTAAATGCCATTCAAACCAATGCTCCCCATCTTTTACGCTATTTGGCCACTGCATTCATTGTTAACAAAAGGCGGCGGCCACAATTCAAAGATTTTATCAAGGTTATTCAGCAGGAACAATATTCCTATAATGATCCCATCACACAGTTTTTGACTTGTGTGTATGTCAATTATGATTTCGATGGGGCACAAAAGAAGATGAGGGAGTGCGAAGAAGTTATATTGAACGATCCTTTCCTAGGAAAGAGGCTTGAAGAAGGTAACCTTTCCACCGTTCCTTTGAGAGATGAGTTTTTGGAAACTGCTCGTCTGTTCGTCTTTGAGACTTTCTGCAGAATACATCAGCGTATTGATATGAGCGTCCTTGCTGAAAAGTTGAACTTGAATTATGAGGAAGCTGAGCGGTGGATTGTAAATCTCGTGCGCACGTCAAAGCTTGATGCGAAGATTGATTCAAAGACGGGAACAGTTATAATGGAAACGAACGAGCCTGACGTGCATGAGCAATTGATCGACCACACGAAGTCATTATCTGGGCGTACTTACAAGTTAGTGACCCAACTTCTAGAGCATGCACAGGCCCAAGCAGCTAGATAA 1314 43.68 MAEYDLTRRIAPNLDRHLVFPLLEFLQERQFYPDEQILKAKIELLNRTNMVDYAMDIHKSLYHTDDVPQGMAISWVEVVARLKALEESAAPLVAFLQNPAAVQELRADKQYNLQMLNDRYQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTDSERSLSALWGKLAAEILMQNWDIAVEELNRLKEIIDSKNFSSPMKQVQGRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSYNDPITQFLTCVYVNYDFDGAQKKMRECEEVILNDPFLGKRLEEGNLSTVPLRDEFLETARLFVFETFCRIHQRIDMSVLAEKLNLNYEEAERWIVNLVRTSKLDAKIDSKTGTVIMETNEPDVHEQLIDHTKSLSGRTYKLVTQLLEHAQAQAAR 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8054421 8057893 + Carg21120-RA Car07g01293 152527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01293 437 ProSiteProfiles PCI domain profile. 219 403 IPR000717 -
Car07g01293 437 Pfam eIF3 subunit 6 N terminal domain 5 137 IPR019010 -
Car07g01293 437 Pfam PCI domain 285 399 IPR000717 -
Car07g01293 437 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 2 429 IPR016650 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00034 Car-Chr3:410259 Car07g01293 Car-Chr7:8054421 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01293 K03250 - csv:101205199 821.617