Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01339 TCCTCTTCTTCCCACAGTTTGGTCAGTGATTTCCATGTTTTGCTTGCTCTCAAACAAGGGTTTCAATTCTCTGACTCTGCTATACTAAGCACTTGGAATGCCTCAAACTTCAGCTCAGTTTGTTCGTGGGTCGGGATTCAGTGCGCTGATGGACGAGTTGTGTCGGTTGACTTGAGAGATTTGAACCTTGGTGGCTCTGTTTCACCGTTGATTTCGAGTCTTGACCAACTTTCTGAGTTGTCTTTAGCAGGAAATAACTTCTCTGGTGGCATTGAAGTAACGAATTTGAGTTACCTTCGATTCCTCAACATCTCAACCAATCAGTTCACTGGGACTCTGGACTGGAACTTCTCGAGCCTGCCGAACTTGGAGGTGTTCGATGTCTATGACAACAACTTCTCTGCTCAGCTCCCCACTAAGATTTTGAACTTACGGAACCTCAAATACTTGGACCTTGGAGGTAACTATTTCCATGGAAAAATCCCTGAGAGCTATGGCAGTTTCGAAGAGTTGCAATATCTTTCTCTTGAAGGAAATAATTTGGTTGGGAAAATCCCAGAAGAACTGGGAAATCTCACGAATTTGAGAGAAATTTACTTGGGTCATTTCAATGCTTTCGAAGGTGGGATTCCACCCGAGCTTGGGAAGTTGGTCAATTTGGTTATCATGCAGATTACAGACTGCAGTTTGAATGGTCAAATTCCTCATGAACTGGGGAATTTGAAGGCCTTGAACACACTATATTTGTATACAAATCAACTCTCGGGTTCGATTCCGAAGCAGATAGGCAATTTGACAAACTTGGTCTATCTCGATCTCTCCAACAATGCACTCACCGGAGAAATCCCATCTGAGTTTGTTAATCTCAAACAGCTCAAGCTTTACAACCTCTTCATCAACAAACTGCACGGATCTATTCCAGACTACATAGCAGATTTACCAAACTTGGAGACATTGGCACTGTGGAGGAACAACTTTACCGGCACAATCCCGAAGATTCTTGGCCAAAATGGGAGGCTTCGGCTCCTCGATTTGTCTTCAAACAAGCTCACGGGTATAATACCGCAAGATTTGTGTTCATCGAATCAGCTGACAATACTGATTCTGATGAACAACTTCCTGTTTGGACCAATCCCTGATGGTTTGGGGACATGTACCAGTCTTATAAAAGTGAGGTTGGGGCAGAACTATCTGAATGGAAGCATTCCCAATGGCTTCATTTACTTGCCTCAACTAAATTTAGCAGAGTTTCAGGACAACTACCTTTCAGGTACACTTTCAGAAAATTGGGAGAGTTCATCAAAGCCCATCAAATTAGGGCAACTTAATCTCTCTAACAATCTTCTCTCAGGATCTTTACCATCTTCACTTTCTAATTTCTCCTCTCTGCAAATTCTCCTCCTCAATGGCAACCAGTTTTCTGGTACAATCCCTCCTTCCATTGGAGAACTCAATCAACTTCTAAGGCTTGATCTTAGCAGAAACACACTTTCTGGTCAAATTCCACCTGAAATAGGGAATTGTATCCATCTTACTTACCTTGATTTGAGCAAGAACAACCTCTCTGGCCCAATCCCACCTGAAATTTCGAATATAAATATTCTCAATTACCTCAACTTGTCGAGAAATCATCTAAATCAATCCCTACCGAAATCAATAGGGGCAATGAAGAGCCTTACGATTGCTGATTTCTCCTTCAATGATTTCTCCGGAAAGTTACCGGAATCAGGACAACTTGCCTTCTTCAATGCTTCGTCCTTTGCCGGAAATCCTCAACTCTGCGGCTCTCTCCTCAACAATCCCTGCAACTTCGCAACAACATCGACAAAACCGGGGAAAACTCCGGCGTACTTCAAGCTAATCTTCGCTCTCGGCCTGCTGATTTGCTCTCTAGTGTTCGCCATAGCGGCTGTAGTCAAAGCGAAATCATTCAAAAGAAACGGATCGAGTTCATGGAAAATGACCTCATTCCAAAAGCTCGATTTCACAGTCTACGACGTCTTGGAGTGCGTGAAAGACGGCAACGTGATCGGACGAGGCGGCGCTGGCATTGTCTACCACGGGAAAATGCCAAACGGAGTCGAGATCGCAGTGAAGAAACTCCTAGGATTCGGCCCTAACAGTCACGACCATGGATTCCGAGCCGAAATCCAAACCCTAGGCAACATTCGACACCGAAACATCGTCAGATTACTCGCGTTCTGCTCCAATAAAGAGACAAATCTCCTCGTATACGAATACATGAGAAACGGAAGCTTAGGCGAAGCACTCCACGGCAAAAAGGCCTCGTTTCTCGGATGGAATTTGAGGTGCAAAATCGCCATTGAGGCTGCCAAAGGTCTCTGCTACCTCCACCACGATTGCTCTCCACTAATCGTCCACCGAGACGTGAAATCGAACAACATTCTCTTGAATACCAACTTCGAAGCTCACGTCGCCGATTTCGGTCTGGCGAAGTTCATGTTCGAGGGCGGCGCGTCGGAATGCATGTCGGTGATCGCCGGCTCTTACGGCTACATTGCTCCTGAATATGCGTACACATTGAGAGTCGACGAGAAAAGTGACGTATATAGTTTTGGAGTTGTGCTATTAGAACTTTTGACGGGTCGTCGTCCAGTTGGAGATTTCGAGGACGGAGTGGTTGACATAGCACAATGGTGCAAAAGAGCTCTAACAAATGGTGAAAATGAAAACGACATTATTTGCATAGTTGACAAAAGGATCGGGATGGTACCTAAAGAGGAAGCAAAACACTTATTCTTCATAGCAATGTTATGTGTGCAAGAGAACAGTGTGGAAAGACCAACAATGAGAGAAGTGGTTCAAATGTTGGCCGAGTTTTCTCATCAGTTTCCCAAATCTTTCCAATCTCCCTCTTCTTCTTCTTCTCCGGATCAAAATTTGAAGAACGGCGAAAAGGAGAGAGAAGATCCCTCCAAATCCAAACTCGATCTTTTGGTTTAA 2964 44.4 SSSSHSLVSDFHVLLALKQGFQFSDSAILSTWNASNFSSVCSWVGIQCADGRVVSVDLRDLNLGGSVSPLISSLDQLSELSLAGNNFSGGIEVTNLSYLRFLNISTNQFTGTLDWNFSSLPNLEVFDVYDNNFSAQLPTKILNLRNLKYLDLGGNYFHGKIPESYGSFEELQYLSLEGNNLVGKIPEELGNLTNLREIYLGHFNAFEGGIPPELGKLVNLVIMQITDCSLNGQIPHELGNLKALNTLYLYTNQLSGSIPKQIGNLTNLVYLDLSNNALTGEIPSEFVNLKQLKLYNLFINKLHGSIPDYIADLPNLETLALWRNNFTGTIPKILGQNGRLRLLDLSSNKLTGIIPQDLCSSNQLTILILMNNFLFGPIPDGLGTCTSLIKVRLGQNYLNGSIPNGFIYLPQLNLAEFQDNYLSGTLSENWESSSKPIKLGQLNLSNNLLSGSLPSSLSNFSSLQILLLNGNQFSGTIPPSIGELNQLLRLDLSRNTLSGQIPPEIGNCIHLTYLDLSKNNLSGPIPPEISNINILNYLNLSRNHLNQSLPKSIGAMKSLTIADFSFNDFSGKLPESGQLAFFNASSFAGNPQLCGSLLNNPCNFATTSTKPGKTPAYFKLIFALGLLICSLVFAIAAVVKAKSFKRNGSSSWKMTSFQKLDFTVYDVLECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGPNSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKASFLGWNLRCKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNTNFEAHVADFGLAKFMFEGGASECMSVIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFEDGVVDIAQWCKRALTNGENENDIICIVDKRIGMVPKEEAKHLFFIAMLCVQENSVERPTMREVVQMLAEFSHQFPKSFQSPSSSSSPDQNLKNGEKEREDPSKSKLDLLV 987
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8425717 8429274 - Carg21073-RA Car07g01339 152573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01339 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Car07g01339 987 Pfam Protein tyrosine and serine/threonine kinase 674 944 IPR001245 GO:0004672|GO:0006468
Car07g01339 987 MobiDBLite consensus disorder prediction 952 987 - -
Car07g01339 987 Pfam Leucine rich repeat 314 372 IPR001611 GO:0005515
Car07g01339 987 MobiDBLite consensus disorder prediction 952 967 - -
Car07g01339 987 ProSiteProfiles Protein kinase domain profile. 671 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g01339 987 Pfam Leucine Rich Repeat 267 289 IPR001611 GO:0005515
Car07g01339 987 ProSiteProfiles Leucine-rich repeat profile. 339 360 IPR001611 GO:0005515
Car07g01339 987 MobiDBLite consensus disorder prediction 968 987 - -
Car07g01339 987 Pfam Leucine rich repeat N-terminal domain 9 48 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00110 Car-Chr3:1471878 Car07g01339 Car-Chr7:8425717 5.37E-07 dispersed
Car07g00534 Car-Chr7:2714563 Car07g01339 Car-Chr7:8425717 0 dispersed
Car07g01339 Car-Chr7:8425717 Car16g00765 Car-Chr16:4852458 0 dispersed
Car16g00176 Car-Chr16:1007984 Car07g01339 Car-Chr7:8425717 0 dispersed
Car07g00002 Car-Chr7:25091 Car07g01339 Car-Chr7:8425717 0 transposed
Car04g00842 Car-Chr4:4908300 Car07g01339 Car-Chr7:8425717 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89025 PF07714 PK_Tyr_Ser-Thr 1.80E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01339 - - csv:101215633 1703.34