Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00029 ATGGACGACTCCACATTCCTGTATTCAGTTCTCTGCATTGCTCTCGTGGTTGCCATAAGCTATGCTTTGAAACAAAAGTCCCGCAAAAATCTCCCTCCAACGCCACCCTCTATCCCAATTATAGGCCATCTCCATCTCCTCAAGCCCCCAGTTCACAGAAGCTTATTAACTCTCTCACAGAAGTATGGCCCAGTGCTTTCCCTTCGTTTCGGCTCTCGTTTAGTCGTTGTTGTCTCGTCCATCGACGCAGCCGAAGAATGCTTCACGAAAAACGATGTCGTTTTCGCTAACCGGCCAGACTTTGCTGTGAGTAAGTGCTTGAGTTACAACCATACCACCCTTGGAGCCGCTCCCTACGGCGACCACTGGCGAAAACTTCGCCGAGTGAGTGCTCTCGAAATACTCTCTGCCAATCGTCTCAACACCAATTCTGCCATTCGAAGAGATGAAGTGAGGAGATTGGTGAATAAACTATCTCAATGTTCGAGAGATGATTTTGCGAGAGTGGAGTTTAAATCCATGGTGAAAGAACTGACGCTGAATATAACGATGAGAATGGTGGCCGGGAAGCGATATTATGGGGAAGAAACAGATGAAAGCAGTGAAGCCAGGACGTTTCGAGCTATTGTCGATGAGCTGTTCGAGTTCATGTTAGCGCAATATCCAGCTGACTTTTTGCCGATCTTGAAGTACATTGATATCCAGGGCTTCATGAAGAGAGCCAAGAAGCTCATCAAAAGGGTGGATGCATTTTGGCAAGGAATCGTTGATGAACATCGAACCAATCAAATCCATAATCAAGAAATGGAGAATAGTATGGTTGCCCATTTCCTCAAGTTGCAGGAGTCGCAGCCTCAATATTACACTGATGACATCATCAAAGGCCTCATTTTGACAATGGTACTCGGTGGCTCAGACACCACTGCGGTGACAATAGAGTGGGCAATGTCAAATCTCCTAAACCATCCAACGGTACTAAAGAAGGCAAGAGCTGAACTAGAGACCCAACTCGGAGATCAATTACTTGAAGAATCCGAGGTTCCAAAGTTAAGCTACCTACGATGTATAGTCCTCGAAACTCTTCGATTGTACCCAGCTGGCCCACTTCTACTGCCACATAAGTCTTCTGCTGACTGTACATTATCAGGATACGACGTGCCACGTGACACGATCTTATTGGTGAATGCGTGGGCCATCCACAGGGATCCCACATTGTGGGAAGATCCAACAAGCTTTAGACCTGAGAGGTTTGAGGGTGGGGATGGCGAGGCCAATAGTAAGTTGATGATTGCATTTGGTTTGGGAAGGAGAGCTTGTCCAGGATCTGGAATGGCACATCGCGTGCTGGGATTGACTTTAGGACTGCTGATTCAATGTTTTGATTGGAAGAGCATTGATGGGAAGGAAGTCGATATGACGGAAGGAAAAGGTGTTAGCATGCCTAAAGCTGAACCACTTGAAGCACTTTGTAAGCCACGACCAATCGCTAGCAAGCTGCTGCTTTGA 1506 46.81 MDDSTFLYSVLCIALVVAISYALKQKSRKNLPPTPPSIPIIGHLHLLKPPVHRSLLTLSQKYGPVLSLRFGSRLVVVVSSIDAAEECFTKNDVVFANRPDFAVSKCLSYNHTTLGAAPYGDHWRKLRRVSALEILSANRLNTNSAIRRDEVRRLVNKLSQCSRDDFARVEFKSMVKELTLNITMRMVAGKRYYGEETDESSEARTFRAIVDELFEFMLAQYPADFLPILKYIDIQGFMKRAKKLIKRVDAFWQGIVDEHRTNQIHNQEMENSMVAHFLKLQESQPQYYTDDIIKGLILTMVLGGSDTTAVTIEWAMSNLLNHPTVLKKARAELETQLGDQLLEESEVPKLSYLRCIVLETLRLYPAGPLLLPHKSSADCTLSGYDVPRDTILLVNAWAIHRDPTLWEDPTSFRPERFEGGDGEANSKLMIAFGLGRRACPGSGMAHRVLGLTLGLLIQCFDWKSIDGKEVDMTEGKGVSMPKAEPLEALCKPRPIASKLLL 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 139176 141070 + Carg03795-RA Car08g00029 152603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00029 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Car08g00029 501 Pfam Cytochrome P450 32 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00029 Car-Chr8:139176 Car20g00833 Car-Chr20:5636520 2.71E-178 dispersed
Car17g01280 Car-Chr17:9700159 Car08g00029 Car-Chr8:139176 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00029 K13260 K25487 csv:101208069 801.201