Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00069 ATGCGCAAGTGGTTTTGTTGTTTTTGTCAAGTTGAAGAGACTAATGAGTCAACTGAAAATGAGCACTTGAAAAGCCCCACTAATTTTGGAGATGGCCACCCAAAGGGCCCAAACGTGTCAGCGCCTGTTAAACCTGAGGCACAAAAGGCAGCACCAACAATTGAAGTGCCTGCACTCTCCCTGGATGAACTGAAAGAAAAGACAGATAATTTTGGGTCGAAAGCATTGATTGGAGAAGGATCTTATGGTAGAGTTTACTATGCAAGCTTGAATAATGGGAAAAATGTAGCTGTAAAAAAGCTCGATGTTTCCTCTGAGCCTGACAGTAACATTGAGTTTTTGACCCAGGTTTCTACAGTATCAAGATTGAAACATGAAAATTTTGTTGAATTGCTTGGATATTGTGTTGAAGGAAATCTTCGTGTATTGGCATATGAATATGCAACCATGGGATCTTTGCATGATGTGTTACATGGAAGGAAGGGAGTACAAGGAGCACAACCTGGTCCAGTGCTCGACTGGATGCAGCGAGTGAGAATTGCAGTTGATGCTGCCAAAGGACTGGAATACTTGCATGAGAAGGTTCAACCTGCTATTATACACCGAGATATCAGGTCCAGCAATGTGCTTCTCTTTGAGGATTTTAAAGCGAAGATAGCTGATTTTAACCTCTCCAATCAAGCCCCTGATATGGCAGCCCGTCTTCATTCAACTCGAGCTACCCCAAGGCTAAGCGAGGACAAAGTGAAGCAATGTGTAGATCCAAGACTAAAGGGAGAATACCCTCCTAAAGGAATTGCGAAGCTAGCAGCAGTGGCTGCATTGTGTGTACAGTACGAATCTGAGTTCCGACCAAATATGAGCATCGTTGTGAAAGCCCTCCAACCTCTTTTGAAGCCCCCCGCACCTACCGGTCCCCCTGCACCAGTGTCTTGA 936 44.55 MRKWFCCFCQVEETNESTENEHLKSPTNFGDGHPKGPNVSAPVKPEAQKAAPTIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYYASLNNGKNVAVKKLDVSSEPDSNIEFLTQVSTVSRLKHENFVELLGYCVEGNLRVLAYEYATMGSLHDVLHGRKGVQGAQPGPVLDWMQRVRIAVDAAKGLEYLHEKVQPAIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRATPRLSEDKVKQCVDPRLKGEYPPKGIAKLAAVAALCVQYESEFRPNMSIVVKALQPLLKPPAPTGPPAPVS 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 404266 408988 - Carg04911-RA Car08g00069 152643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00069 311 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Car08g00069 311 Pfam Protein tyrosine and serine/threonine kinase 76 230 IPR001245 GO:0004672|GO:0006468
Car08g00069 311 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Car08g00069 311 MobiDBLite consensus disorder prediction 17 36 - -
Car08g00069 311 ProSiteProfiles Protein kinase domain profile. 71 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g01390 Car08g00069 CCT
Car08g00069 Car14g01325 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00235 Car-Chr1:1299989 Car08g00069 Car-Chr8:404266 2.86E-19 dispersed
Car08g00069 Car-Chr8:404266 Car14g01325 Car-Chr14:11207128 1.02E-162 dispersed
Car17g00545 Car-Chr17:5071048 Car08g00069 Car-Chr8:404266 2.11E-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89031 PF07714 PK_Tyr_Ser-Thr 5.30E-30 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00069 K13436 - sspl:121756417 451.055