Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00173 ATGATGAGAGAGAGAAGAACAAGGTGGCTTGTTCTCTCCCTTGTGGGGCTAGCGTTGATGAGCTACCTGTGCAGCGTGAAGGCTGAGAACACATTGCAGCCGCCGGTGAAGCTCATATGGCATTACTACAAGCTCAACACAACATGCCCTGATGCTGAGACATACATAAAGCATCAGGTCAAGTTGTTTTGGCAAAAGGATAAGAGCATCACTGCCAAGTTCCTCCGCTTGCTCTCCGCCGATTGCCTCTCCAAAAACAGATTTTTAAGAAATTTTGGATGGAAAGATAGTTTGAAGGGTTGTGATGGTTCGATACTTCTTGATGGACGAAACTCAGAGAAAAACGCACCGCAAAACCAAGGCCTAGAAGGGTTCGAAGAAATCGACAAGATCAAAATTGTACTCGAAGACCGTTGTCCGGGTGTTGTTTCTTGTACAGATATTCTTAACCTAGCCACTCGAGATGCTGCCCATTTGGCCGGTGCGCCGTCGTATCCAGTTTATACGGGAAGGAGGGATTGTTTAAGAACGAGTATCGATGCGGTAGATTTCCCGTCCCCCTCTATATCATGGCAAGAAGGGCTAGCGTATTTCGAGTCCAAGAGTCTCGACGTCTTAGACATGGCAACACTTCTAGGAGCACATTCAATGGGGAAAACACATTGCAGCTACATCAAGGACAGGCTATACAATTTCAATGGCACAAAAAAAGCAGACCCAACAATGAACAAATCATTGTTAAAACAGCTTCAAAAGAAATGCCCAAAGAAATCAAAAACAGACCCAACAGTGAATCTAACACCAAAATCTGGAAATGACTATCAATTCACAGGGCTCTACTACTCGAGGATCCTTTCGAAGAAGGCGGTACTCGGGATCGACCAACAGCTTCGGTTCGGGGACGACACGATGCAAATTGCGCAAGAGTTTGCTCCAAAATCTGGATTTGAAGACTTCCGGAGGTCCTTTGCTTTGTCCATGAGTAGGATGGGGAATATCAAGGTTTTGACCGGAAAAGATGGCGAGATCCGGCGAAATTGTCGCCGGAGAAACTAG 1056 46.02 MMRERRTRWLVLSLVGLALMSYLCSVKAENTLQPPVKLIWHYYKLNTTCPDAETYIKHQVKLFWQKDKSITAKFLRLLSADCLSKNRFLRNFGWKDSLKGCDGSILLDGRNSEKNAPQNQGLEGFEEIDKIKIVLEDRCPGVVSCTDILNLATRDAAHLAGAPSYPVYTGRRDCLRTSIDAVDFPSPSISWQEGLAYFESKSLDVLDMATLLGAHSMGKTHCSYIKDRLYNFNGTKKADPTMNKSLLKQLQKKCPKKSKTDPTVNLTPKSGNDYQFTGLYYSRILSKKAVLGIDQQLRFGDDTMQIAQEFAPKSGFEDFRRSFALSMSRMGNIKVLTGKDGEIRRNCRRRN 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1048815 1050607 - Carg05018-RA Car08g00173 152747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00173 351 Pfam Peroxidase 57 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g00173 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Car08g00173 351 ProSiteProfiles Plant heme peroxidase family profile. 37 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00173 Car-Chr8:1048815 Car10g00511 Car-Chr10:2562428 1.64E-59 dispersed
Car08g00173 Car-Chr8:1048815 Car03g00891 Car-Chr3:7086082 1.50E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00173 K00430 - csv:101213667 563.148