Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00214 ATGATCGATGATGATGTGAAGAAAGATCATAACTCTGAGCAGATTCCTGATTTGGATTTTCAGAAATTGGAAGTCGTAACGGCGCTCGGTCGAGGAGCGAAAGGAGTTGTGTTCTTGGCTCGAAATGCGAACGATGACGACGGCGATGGCGAATGGCTGGCGTTGAAGGTGATTTCTAGAGATTTGATCGAGAGGAAGGCTAAGATTGTGAATAGCGATGCCGATGAGTATCGCAGAGTTTGCTTTGAACGAGAAGTTTTACGTCAGTTTCGGCATCCGCTTTTGCCTCGATTGCGAGGAGTTTTGGATACGAAGAAAGTTGTTGGTTACGCCATTGATTATTGCAATGGACGAGATCTTAATACTCTCAGGAAGAAACAGACCGAGAAAATGTTCTCCGATGACGTTATTAGATTCTACGCGGCGGAATTAGTTATGGCGTTGGAGTATGTACACAGCCTAGGAATAGTTTACAGAGATTTAAAGCCGGACAACGTTATGGTTCAACATAACGGCCACATAATGCTTGTAGATTTTGATCTGTCCACGAGGCTCTCTCAGAAATCTCCTAAATCGTCTCCGTTATTGTTGCCGTCGGTGGAGGTTTTGACGGAATCTAGATCGACGATTAAGAAAAAAAGCAAGAAGAAAAGATTCTTTCATTTTCACCGATTCTGCAACTCCGGCGTGTCGCCGGAAGATTCAGACCAACAGACGGCCAATAAGCCAAAATCTCCGCCAGATTCGTCGGAATCCGACTCATCGGAGAAGTCGAACTCGTTCGTCGGAACAGAGGAGTACGTGGCGCCGGAGATAGTCTCCGGGAAGGGGCATGACTTCGCCGTGGACTGGTGGTCGCTCGGAGTAGTTCTGTACGAGATGCTATACGGAACGACGCCGTTTAGAGGATCTAATCGGAAAGAAACGTTCTACCGAATACTGACAAAGACGCCGGATCTCAGCGGCGAAGTAACACCGTTAAGGGATTTGATAAGGAAATTGCTGGAGAAAGATCCAACGAGGAGGATCGAACTGGAGGAAATCAAGAGCCACAATTTCTTTAAAGGAACTGACTGGGATTTGGTCCTGGAAATTCCCCGGCCGCCGTCGCTGCCGGCAATAGCGACGGAGGACACAGATGGAAATAACTTAATAGATGTTGAGTCTTTCGTCCAAGATATATTTTGCAGCGAAACGGAGAAGAAGAATCGTACGAACGGCGATGAAGGGAACGGGTTTATTCCCACTAATTACACGGAGTCTGACAGATTTCATGTATTCTGA 1284 46.65 MIDDDVKKDHNSEQIPDLDFQKLEVVTALGRGAKGVVFLARNANDDDGDGEWLALKVISRDLIERKAKIVNSDADEYRRVCFEREVLRQFRHPLLPRLRGVLDTKKVVGYAIDYCNGRDLNTLRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPDNVMVQHNGHIMLVDFDLSTRLSQKSPKSSPLLLPSVEVLTESRSTIKKKSKKKRFFHFHRFCNSGVSPEDSDQQTANKPKSPPDSSESDSSEKSNSFVGTEEYVAPEIVSGKGHDFAVDWWSLGVVLYEMLYGTTPFRGSNRKETFYRILTKTPDLSGEVTPLRDLIRKLLEKDPTRRIELEEIKSHNFFKGTDWDLVLEIPRPPSLPAIATEDTDGNNLIDVESFVQDIFCSETEKKNRTNGDEGNGFIPTNYTESDRFHVF 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1327638 1329245 - Carg05061-RA Car08g00214 152788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00214 427 Gene3D Phosphorylase Kinase; domain 1 23 118 - -
Car08g00214 427 SMART serkin_6 23 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00214 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Car08g00214 427 PANTHER FLIPPASE KINASE 1-RELATED 13 407 - -
Car08g00214 427 MobiDBLite consensus disorder prediction 230 261 - -
Car08g00214 427 SUPERFAMILY Protein kinase-like (PK-like) 22 390 IPR011009 -
Car08g00214 427 Pfam Protein kinase domain 252 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00214 427 Pfam Protein kinase domain 24 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00214 427 Gene3D Transferase(Phosphotransferase) domain 1 251 373 - -
Car08g00214 427 Gene3D Transferase(Phosphotransferase) domain 1 119 189 - -
Car08g00214 427 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 13 407 - -
Car08g00214 427 ProSiteProfiles Protein kinase domain profile. 23 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01021 Car-Chr2:7176710 Car08g00214 Car-Chr8:1327638 2.50E-85 dispersed
Car08g00214 Car-Chr8:1327638 Car03g01056 Car-Chr3:8614273 5.83E-71 dispersed
Car08g00214 Car-Chr8:1327638 Car20g00057 Car-Chr20:317095 1.67E-97 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89038 PF00069 Pkinase 7.50E-30 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00214 K20714 - csv:101223223 615.535