Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00219 ATGTCTCGAACACCGAATTTTGAGTTCCAAGAATGGTGGAACAAGCAGAGAGAAAAAGAACACGACGAACTCCGACTGGAAAAGTCCGGCAACTTCCCGACCTCACCTGCATTTCTATCTCTTGAGATCCGGAGTTCTGGGAGCCCTGGAGATCGAACAGCCGATAAGGACCGGGCGAGAACGAGGAGTGCCCGCCAGATTTCTTGGGTTTGGCTGTTGAAATTCCAGCAGATTGCTGGTTCTCTGGCTTCAATCACCAATGGGTTCGTTCATCTTATCCGCACTGCCAATCGTCGGATTGCATCACATGATTCTCCAGCTGATTCGGCCTCGTCTCGGCTCTATAAGATAATCAAAGTGTTCTTGATTGTGGTGCTTCTGTTGCTCGTTTTTGAGCTTGTGGCGTACTTCAATGGCTGGCATTTCAAACCCCCTAACGTGAGTTCCGCTTCTGCGGAAGTGCTTGGAATGATTGGGTTTGTGTATGCTAGTTGGCTTGAGATTCGAGCAAATTACTTGGCTCCACCGCTGCAGAGCTTGATCAATTTGTGCATTGTGTTATTCCTGTTCCAGTCAGTGGATCGTTTGGTTTTAATGATGGGGTGTTTTTGGATAAAATTCTGGGGATTGAAGCCCGTGGCGGCGTTTGAGTACTCGGACACTGATGAGAATGCTCCTGAGGATTATCCAATGGTATTGGTGCAGATTCCCATGTGCAATGAGAGGGAGGTCTACCAGCAATCTATTGCAGCTGTTTGTATCCAGGACTGGCCAAAGGATAGAATACTTGTTCAGGTTTTAGATGATTCTGATGAAGTAGAAGTTCAACAACTTATCAATGCTGAAGTACAAAAATGGCAACAAAGAGGTGTCCACATATTGTATAGACACCGCCTCATGCGTACAGGCTACAAGGCAGGGAATCTCAAATCTGCTATGGCATGTGATTATGTAAAAGATTACGAGTTTGTGGCAATCTTTGATGCAGATTTTCAGCCAGGACCAGACTTTTTAAAGAAAACCATTCCACATTTCAAGGGGAATGATGAACTTGCATTGGTCCAAACAAGGTGGTCATTTGTGAACAAGGACGAAAATTTGCTCACAAGATTGCAGAACATAAATTTATCCTTCCATTTTGAGGTTGAGCAGCAAGTAAATGGCATGTTTATCAACTTTTTTGGTTTCAATGGAACTGCTGGAGTCTGGAGAATTAAAGCTCTGGAAGAATGTGGAGGCTGGTTAGAAAGAACAACTGTTGAGGACATGGATATTGCAGTTCGTGCCCATCTTTGTGGCTGGAAGTTCATATTTCTTAATGATGTGAAGTGCCTTTGTGAACTTCCGGAATCATATGAAGCGTACAAGAAACAACAACACCGATGGCATTCAGGCCCAATGCAGCTATTTCGTTTGTGCTTCTCTGATATACTCAAATCGAAGGTAAGTTGGAAGAAGAAAGCTAATTTGATATTTCTTTTCTTCCTTTTGCGAAAGCTTATCCTTCCCTTTTACTCATTTACCTTGTTCTGCATAATTCTACCCCTTACCATGTTCCTTCCAGAGGCTCATCTACCAGCTTGGGTTGTTTGCTATGTTCCCGGAATGATGTCCATCTTAAACATTCTCCCTTCACCACAGTCGTTTCCTTTTATAGTCCCCTATCTTCTCTTTGAAAACACCATGTCTGTTACCAAATTCAATGCCATGATATTGGGATTATTCCGCTTTAAAAGTTCGTACGAATGGATAGTAACAAAAAAACTAGGAAGATCATCCGAAAACGATCTTGTTACTTTTGAAAAAGAACAAGAACTTTTGGTTGAAGGTACTACTAGTCTTCATCGGTCATCCTCGGAATCAGGTCTTCTGGACCTAACCAAGCTCGAGATATCGAAAAAAACAGGGAAATGCAAAAGAAATCGTCTGTACAGGAAGGAATTGGCTCTTGCATTCATTTTGTTAACAGCCTCCGTCAGAAGTTTGTTATCTGCACAAGGAATTCACTTCTACTTCCTATTATTTCAAGGTATCACTTTTCTAGTGGTGGGTCTCGATTTAATTGGAGAGCAGGTGAGCTAA 2082 42.7 MSRTPNFEFQEWWNKQREKEHDELRLEKSGNFPTSPAFLSLEIRSSGSPGDRTADKDRARTRSARQISWVWLLKFQQIAGSLASITNGFVHLIRTANRRIASHDSPADSASSRLYKIIKVFLIVVLLLLVFELVAYFNGWHFKPPNVSSASAEVLGMIGFVYASWLEIRANYLAPPLQSLINLCIVLFLFQSVDRLVLMMGCFWIKFWGLKPVAAFEYSDTDENAPEDYPMVLVQIPMCNEREVYQQSIAAVCIQDWPKDRILVQVLDDSDEVEVQQLINAEVQKWQQRGVHILYRHRLMRTGYKAGNLKSAMACDYVKDYEFVAIFDADFQPGPDFLKKTIPHFKGNDELALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNGMFINFFGFNGTAGVWRIKALEECGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFSDILKSKVSWKKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAHLPAWVVCYVPGMMSILNILPSPQSFPFIVPYLLFENTMSVTKFNAMILGLFRFKSSYEWIVTKKLGRSSENDLVTFEKEQELLVEGTTSLHRSSSESGLLDLTKLEISKKTGKCKRNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVS 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1375560 1382932 + Carg05066-RA Car08g00219 152793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00219 693 Pfam Glycosyl transferase family group 2 324 530 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00219 Car-Chr8:1375560 Car15g00304 Car-Chr15:1646301 0 dispersed
Car17g01200 Car-Chr17:9173740 Car08g00219 Car-Chr8:1375560 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00219 - - csv:101216681 1223.38