Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car08g00285 | ATGGAAGAGGTTGAAGAAGCTAATAGAGAAGCTGTGGAGAGTTGTCATAAAGTGTTGAATCTATTGACTCTCGCGTTGCCTCAAGATCGTCAATCCAAGATTCAGAGTTGTTTAATGGCGGAAACTGGAGCGGCTGTGTTTAAGTTTAGGAAGGTTTTGTGTCTTCTTAATTCTTCTTCTTCTGGGTTGGGGCATGCAAGGGTCAGGAAAAACAGGGTTAAGCCACCCTTCTCTTCCTCTTCCTCCTCTTCTCCTCTTCCCCAATCCATGTTCTTACAAACTTCTTCCCCCGATTGCAGAATGGACCTTCTCCAGGCCAGGAATTTGCAGATGGGTCCTCTTTCTTTGGGGAATCCATGTCTGGAATTGAGCTCAAATGCTAAAAGTTGTTCAATCCAACAACCTCAGTCTACTTCCCATCATTTTCTTCAGAACAGGATGTTGTTGAATAATCCTAATCCTAATGCTCCACAGCCTGAAATGGTGTATCTTAGGAGCCACAGTGGTATTAACTTGAATTTTGATAGCTCTAGCTGCACACAACACACAATGTCATCCACTAGGTCTTTCATTTCTTCATTGAGCATTGATGGGAGTGTGGCTAACTTGGATGGGAGTGGCTTTCATTTGATCGGGACGCCCCGATCTTCTGATCAGAATTCACACCATAGGAGGAAGTGCAGTGGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGTACAGGGAGATGTCACTGCTCAAAGAAGAGGAAACATAGAGTGAAGCGGTCGATCAAGGTGCCCGCCATAAGTAACAAGCTTGCAGATATTCCTCCTGACGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCTCCTCACCCAAGAGGATACTATAAGTGCAGCAGCATGAGAGGTTGTCCAGCGAGGAAACACGTCGAGAGGTGTGTCGAGGAACCGTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCGAGAATAGCTTCTCAGTCTGAAAATACTTGA | 1020 | 45.0 | MEEVEEANREAVESCHKVLNLLTLALPQDRQSKIQSCLMAETGAAVFKFRKVLCLLNSSSSGLGHARVRKNRVKPPFSSSSSSSPLPQSMFLQTSSPDCRMDLLQARNLQMGPLSLGNPCLELSSNAKSCSIQQPQSTSHHFLQNRMLLNNPNPNAPQPEMVYLRSHSGINLNFDSSSCTQHTMSSTRSFISSLSIDGSVANLDGSGFHLIGTPRSSDQNSHHRRKCSGRGEDGSVKCGSTGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCVEEPSMLIVTYEGEHNHPRIASQSENT | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1797830 | 1799778 | - | Carg25782-RA | Car08g00285 | 152859 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car08g00285 | 339 | MobiDBLite | consensus disorder prediction | 218 | 232 | - | - | |
Car08g00285 | 339 | ProSiteProfiles | WRKY domain profile. | 266 | 332 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car08g00285 | 339 | MobiDBLite | consensus disorder prediction | 74 | 91 | - | - | |
Car08g00285 | 339 | Pfam | Plant zinc cluster domain | 224 | 269 | IPR018872 | - | |
Car08g00285 | 339 | MobiDBLite | consensus disorder prediction | 65 | 91 | - | - | |
Car08g00285 | 339 | MobiDBLite | consensus disorder prediction | 212 | 234 | - | - | |
Car08g00285 | 339 | Pfam | WRKY DNA -binding domain | 273 | 330 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car02g01517 | Car08g00285 | CCT | |
Car08g00285 | Car19g00051 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car08g00285 | Car-Chr8:1797830 | Car19g00051 | Car-Chr19:341369 | 4.25E-124 | dispersed | |
Car17g01151 | Car-Chr17:8826624 | Car08g00285 | Car-Chr8:1797830 | 3.90E-180 | wgd | |
Car02g01517 | Car-Chr2:9786948 | Car08g00285 | Car-Chr8:1797830 | 1.68E-71 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
3951 | PF03106 | WRKY | 3.30E-26 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car08g00285 | - | - | csv:101216822 | 533.487 |