Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00285 ATGGAAGAGGTTGAAGAAGCTAATAGAGAAGCTGTGGAGAGTTGTCATAAAGTGTTGAATCTATTGACTCTCGCGTTGCCTCAAGATCGTCAATCCAAGATTCAGAGTTGTTTAATGGCGGAAACTGGAGCGGCTGTGTTTAAGTTTAGGAAGGTTTTGTGTCTTCTTAATTCTTCTTCTTCTGGGTTGGGGCATGCAAGGGTCAGGAAAAACAGGGTTAAGCCACCCTTCTCTTCCTCTTCCTCCTCTTCTCCTCTTCCCCAATCCATGTTCTTACAAACTTCTTCCCCCGATTGCAGAATGGACCTTCTCCAGGCCAGGAATTTGCAGATGGGTCCTCTTTCTTTGGGGAATCCATGTCTGGAATTGAGCTCAAATGCTAAAAGTTGTTCAATCCAACAACCTCAGTCTACTTCCCATCATTTTCTTCAGAACAGGATGTTGTTGAATAATCCTAATCCTAATGCTCCACAGCCTGAAATGGTGTATCTTAGGAGCCACAGTGGTATTAACTTGAATTTTGATAGCTCTAGCTGCACACAACACACAATGTCATCCACTAGGTCTTTCATTTCTTCATTGAGCATTGATGGGAGTGTGGCTAACTTGGATGGGAGTGGCTTTCATTTGATCGGGACGCCCCGATCTTCTGATCAGAATTCACACCATAGGAGGAAGTGCAGTGGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGTACAGGGAGATGTCACTGCTCAAAGAAGAGGAAACATAGAGTGAAGCGGTCGATCAAGGTGCCCGCCATAAGTAACAAGCTTGCAGATATTCCTCCTGACGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCTCCTCACCCAAGAGGATACTATAAGTGCAGCAGCATGAGAGGTTGTCCAGCGAGGAAACACGTCGAGAGGTGTGTCGAGGAACCGTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCGAGAATAGCTTCTCAGTCTGAAAATACTTGA 1020 45.0 MEEVEEANREAVESCHKVLNLLTLALPQDRQSKIQSCLMAETGAAVFKFRKVLCLLNSSSSGLGHARVRKNRVKPPFSSSSSSSPLPQSMFLQTSSPDCRMDLLQARNLQMGPLSLGNPCLELSSNAKSCSIQQPQSTSHHFLQNRMLLNNPNPNAPQPEMVYLRSHSGINLNFDSSSCTQHTMSSTRSFISSLSIDGSVANLDGSGFHLIGTPRSSDQNSHHRRKCSGRGEDGSVKCGSTGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCVEEPSMLIVTYEGEHNHPRIASQSENT 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1797830 1799778 - Carg25782-RA Car08g00285 152859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00285 339 MobiDBLite consensus disorder prediction 218 232 - -
Car08g00285 339 ProSiteProfiles WRKY domain profile. 266 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car08g00285 339 MobiDBLite consensus disorder prediction 74 91 - -
Car08g00285 339 Pfam Plant zinc cluster domain 224 269 IPR018872 -
Car08g00285 339 MobiDBLite consensus disorder prediction 65 91 - -
Car08g00285 339 MobiDBLite consensus disorder prediction 212 234 - -
Car08g00285 339 Pfam WRKY DNA -binding domain 273 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01517 Car08g00285 CCT
Car08g00285 Car19g00051 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00285 Car-Chr8:1797830 Car19g00051 Car-Chr19:341369 4.25E-124 dispersed
Car17g01151 Car-Chr17:8826624 Car08g00285 Car-Chr8:1797830 3.90E-180 wgd
Car02g01517 Car-Chr2:9786948 Car08g00285 Car-Chr8:1797830 1.68E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3951 PF03106 WRKY 3.30E-26 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00285 - - csv:101216822 533.487