Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00362 ATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACCGCCACAGCCAGAGTTCTTGCTTGTCTTTACGAGAAAGATCTCGAATACCAGTTTGTTCTTCTGGACATGAAGAATAATGAGCACAAGAAAGAGCCCTTCCTCTCCATCAATCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACGATTTTCGAATCAAGGGCCATTACCCAGTACCTGGCCTCCGCCTACGCCAGCAAGGGAAACCAATTGCTGTCGGACGACCCAAAGAAAGCAGCGATCATATCAACATGGATTGAAGTGGAAGGCCACCACTACGACCCACCGGGGGTAGCGCTCTCGTACGAGTATCTTGTCAAGCCACTATTCGGTCTGGGCGAGACAGATCCCGCCGCCGTGGCTGAGAACGAAGCTAAGTTGGGGAAAGTTCTTGACATCTACGAGAATCAGCTTGGCAAAAGCAAGTTCTTGGCTGGCGATACGTTCAGTTTGGCAGATCTGCACCACATCCCCAATGTGCACTACTTGTTGGCGACGCCATCGAAGAAGCTGTTCGAGTCACGGCCGCGCGTTAATGCTTGGGTTGCTGAGATCACTGCAAGGCCTTCGTGGGGCAAGGTCCTTGCCTTGCGCAATCAGAAATTGTAA 654 51.68 MASIKVHGSPISTATARVLACLYEKDLEYQFVLLDMKNNEHKKEPFLSINPFGQVPGFQDGDLTIFESRAITQYLASAYASKGNQLLSDDPKKAAIISTWIEVEGHHYDPPGVALSYEYLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLGKSKFLAGDTFSLADLHHIPNVHYLLATPSKKLFESRPRVNAWVAEITARPSWGKVLALRNQKL 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2341432 2342919 + Carg22147-RA Car08g00362 152936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00362 217 CDD GST_C_Phi 92 210 IPR034347 -
Car08g00362 217 Pfam Glutathione S-transferase, C-terminal domain 129 204 IPR004046 -
Car08g00362 217 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Car08g00362 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Car08g00362 217 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Car08g00362 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Car08g00362 217 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 216 - -
Car08g00362 217 CDD GST_N_Phi 4 76 - -
Car08g00362 217 SUPERFAMILY GST C-terminal domain-like 74 213 IPR036282 -
Car08g00362 217 Gene3D - 90 214 - -
Car08g00362 217 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 216 - -
Car08g00362 217 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Car08g00362 217 Gene3D Glutaredoxin 1 87 - -
Car08g00362 217 SFLD Main.5: Phi-like 1 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00362 Car-Chr8:2341432 Car16g00531 Car-Chr16:3367926 5.24E-10 dispersed
Car08g00362 Car-Chr8:2341432 Car08g00363 Car-Chr8:2343399 1.39E-104 tandem
Car12g00363 Car-Chr12:2329870 Car08g00362 Car-Chr8:2341432 5.26E-66 transposed
Car17g01048 Car-Chr17:8193561 Car08g00362 Car-Chr8:2341432 9.99E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00362 K00799 - csv:101212771 398.282