Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00400 ATGGTGGCTGAAACTAAGGTTGTTGTGTGTTCGAAGAGCCTCCCTGTTTTGGAGGTCCCCTATTTCGGTAAAGAGGCTCATCTTGTTGATGAAATGAAGTCCATCGACGGTGCGATTCCCCTTGATCCGACTCTCGATCGTGTTCGCGCTTCCGAATCGGTTTGTTCGAGTTCTCAATCGGATGTGGAGCAAATTCCAGATACCGACGTCGATTCGATGGAGCAGAGGGAATTTCCAAGTCTCCGGTCGGGGAGCTTTGCTGATATTGGACCTAGGAGAGACATGGAGGATGAACACATAAGGATTGACGATCTGTGTTCACATTTAGGCTCGCTCTTTAAGTTTTCTAAGCCAAGTGGTTTCTATGGGGTGTTTGATGGACATGGAGGACCTGAAGCAGCAGCTTATATAAGAAAGAATATTCTTAGACTCTTTTTTGAAGATGTTAGGTTTCCTCACATGCCTGATGTTGATGAACTCCGGCCGGAGGAGATTGAAAATTTCTTACGAGAAGCATTTCTTCTGGCCGATCAAGCTCTGGCTGATGATTCTGGGATTAGTAATTTGTCTGGGACGACGGCCCTCACTGCTCTTGTGCTTGGAAGGCTTCTAATGGTGGCTAATGTTGGAGATTGCCGGGCTGTTCTTAGTCGGAAGGGAGAGGCAGTAGATATGTCTCAAGACCACAGGCCAATTTATTCACCGGAGAAGGAACGAGTAGAAGAGTTGGGTGGCTTCGTCGATGGTGGCTATCTTAACGGCCTTTTATCAGTTTCCAGGGCCTTGGGTGATTGGGACATGAAGCTCCTCCCCCATGGTTCTCCTTCACCCCTCATTGCAGAACCAGAATGCAGGCAGGTGGTTCTAACAGAGGAGGATGAGTTCTTAATCATAGCCTGCGATGGGATTTGGGACGTGATGTCAAGCCAGCATGCAGTCGATGTAGTTCGCCGGGGACTTCAGCGACATGACAACCCCGAGCGTTGCGCTCGAGATCTCGTCCTGCAGGCTTTAGGACTAGACTCATTCGATAATCTCACCGTTGTCATTGTTTGCTTCTCTAGTTTCCAAAGGGACAACTCTCCACAACCACAGCAACGAAAATTGAGATACTGCAGCCTCTCTGCTCAAGCCCTTTGTAGCTTGCAGAGATCGTTGGATAAGAGTGGATGCCAATGA 1179 48.52 MVAETKVVVCSKSLPVLEVPYFGKEAHLVDEMKSIDGAIPLDPTLDRVRASESVCSSSQSDVEQIPDTDVDSMEQREFPSLRSGSFADIGPRRDMEDEHIRIDDLCSHLGSLFKFSKPSGFYGVFDGHGGPEAAAYIRKNILRLFFEDVRFPHMPDVDELRPEEIENFLREAFLLADQALADDSGISNLSGTTALTALVLGRLLMVANVGDCRAVLSRKGEAVDMSQDHRPIYSPEKERVEELGGFVDGGYLNGLLSVSRALGDWDMKLLPHGSPSPLIAEPECRQVVLTEEDEFLIIACDGIWDVMSSQHAVDVVRRGLQRHDNPERCARDLVLQALGLDSFDNLTVVIVCFSSFQRDNSPQPQQRKLRYCSLSAQALCSLQRSLDKSGCQ 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2592128 2594560 + Carg13403-RA Car08g00400 152974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00400 392 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Car08g00400 392 ProSiteProfiles PPM-type phosphatase domain profile. 82 353 IPR001932 -
Car08g00400 392 Pfam Protein phosphatase 2C 92 345 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00400 Car17g00957 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00400 Car-Chr8:2592128 Car08g01163 Car-Chr8:7791056 3.15E-112 dispersed
Car09g00698 Car-Chr9:4134179 Car08g00400 Car-Chr8:2592128 2.19E-29 dispersed
Car17g00957 Car-Chr17:7770078 Car08g00400 Car-Chr8:2592128 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00400 K14803 - csv:101216626 632.484