Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00430 ATGGCGAGGACTAGGGTTCGTGAGCCATCGCGATTGTTAGCTGGTAATACATGCAGGATTCGCCTCAGTGAAATTTTCGGGAGGGCGACCCGGTCTATTTTGGGCTTTTTTCTCATGATGGGTCTTTGCAATGGCGTGCATTACCTTTTTAGGCCTTTTTCTCAACCTCGTATTAGCTCTGATACGATCGTAGGTTTGGTTGTTGGGAACTTCATAAGGAAACAACTCGATTTATCAACGCTTAAGACGCTGCGTTATATCGTTGACTTTGGTATGATATGCTATATGTTCTCGCTGGGTTTGGAGATGGATCCATACATACTCTTCAAAGCACCTACACGTGATGCTAAAGTAGCTTACGCTGGGATGATTTCGACACTGGTCTTAGCTTGTTCCATAACCCCATTTATCAGTTTTTCAAAGACAAAAGAGATCAGTTTCATCCTCTCCCTCTCAACTGTCCTCTCTAGCACAGCTTCTCCTGTGCTAACCCGTTTGATCACCCGTCTTAAAATAGGCAAGTCGGATATAGGTCGACTCGTTATTGCTGCTGGGATGCATTCTGATTTTATATCCACTCTCATTATCTGTATTGGTTATCTCTTTTGCAAATGTCAAGAGATGATAGTCGCAGCGAAGGTTTCGCCTGTATTTATGAACTGGGTTAATAATGAAAACCCCGAGGGTAAACCTATGAAAGGTCCTCACCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCAGCTGCCCTACTATACTCGGTTACAATCCGATTCTCAGTGCATTCTTAGCGGGAACGTTTTTACCTCGAGAAGGTCGAGTATCGAGATGGGCCATTGGAAAAATTAACTACCTGCTTAGTACCGTTTTCTATCCCATCTTCTTCTTTTGGATGGGGGCTGAATCCAGGTGGAGTGACTTTGAACCTGGACAAATAATGACATGGGTCAGGTTGATTCTTCTTTTTGTCATTGCAACCGTAGGAAAAGTTGTTGGTACTGTGATTGCTGGGGCAATTTTGGGGTTTCATTGGCCTGAATCAGTAGCACTTGGGCTGCTGTTAACCATGAAGGGCCATTTTCACATATACTTGGCCATTGCTGCAAAAACCGCTGGAAAGACGACGACTTCTACGAGCATTGGGATGGTAATTGTAATCTTCTTCACAATCGTGCATGCGCCAAAAGTTGTCGCACATATAATCAAAAGGGCAAGGAAACGTACACCTACCCATCGAATGGCGCTCCAATTGCTCGATCCATCAAGCGAGCTTAAGATCTTGTTATGTATACATGGACTTCAGAACACTTCAGCAGCCATTAACATCATGGAGATTTCTCGGGGGATGGCTAAACCTGGAGTTGTTGTATATCTCACAGACATGATTGAACTTACAGATGAAATAGCAGCCACGTTAGTGCAGGTTGAAGGAGAGGACACCCTGACTGTAACTCACGCGGGAGTGAGACAAATGAGAGACCAAATTACTGCTGTGGTTCAGAGCTATGTAGACGAAAATGGAGACGGAATTACACTTGGAAGAATGCTAGCTCTCTCAGCATTCAATTCTATGGCTCAGGACATATGCATTTTGGCTGAGGAATTGATGGGAGCTCTTATCATACTGCCATTTCACAAGAGCCAGCGTGCTGATGGGTCTTTGAGTGAGGGCAATTCGGGTTTTCGCTACGTCAACCGCAAGGTTCTCAGGAATGCCCCATGCTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGAACAGTAGAGAAAATTTCGAGATCGTATGCATCTCTGAATGTGGCAGTCATCTTCATCAGCGGTAAAGATGACCGAGAAGCATTAGCGTATGCAGCTCGAGTAGCAAGGCATCCTGGAGTTAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGCTGCAGAGAATGCTGCAAGAAGAGCTGGGACTTACAGGATAAGTGTTGCTGAGCAGGAAGAGGAAATGAGACTAGACGATGAATGTTTTGCTACTTTTTACGAACGACACGTGGCTGGTGGGCACGTTGCTTATGTTGAAAAGCACCTTGCAAGTTCTGCAGAGACATATTCTACATTGAAATTACTGGAAGGGCAATATGCACTCATAATCGTCGGTCGAGGTGGGAAGGTGAACACGGTGTTAACTTTTGGGATGAATGACTGGCAACAATGTCCAGAACTTGGTCCTATAGGGGATGTTCTTTCGGGGTCTGAATTCTCTGTTAGGACCTCGGTTTTAGTCATCCAACAACACAATCTAAAAGGAGAACTAGATGGACTTGATGATGATTTTTCTATTATGGAGATGTCAAGAAACCGATGA 2337 44.67 MARTRVREPSRLLAGNTCRIRLSEIFGRATRSILGFFLMMGLCNGVHYLFRPFSQPRISSDTIVGLVVGNFIRKQLDLSTLKTLRYIVDFGMICYMFSLGLEMDPYILFKAPTRDAKVAYAGMISTLVLACSITPFISFSKTKEISFILSLSTVLSSTASPVLTRLITRLKIGKSDIGRLVIAAGMHSDFISTLIICIGYLFCKCQEMIVAAKVSPVFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCSCPTILGYNPILSAFLAGTFLPREGRVSRWAIGKINYLLSTVFYPIFFFWMGAESRWSDFEPGQIMTWVRLILLFVIATVGKVVGTVIAGAILGFHWPESVALGLLLTMKGHFHIYLAIAAKTAGKTTTSTSIGMVIVIFFTIVHAPKVVAHIIKRARKRTPTHRMALQLLDPSSELKILLCIHGLQNTSAAINIMEISRGMAKPGVVVYLTDMIELTDEIAATLVQVEGEDTLTVTHAGVRQMRDQITAVVQSYVDENGDGITLGRMLALSAFNSMAQDICILAEELMGALIILPFHKSQRADGSLSEGNSGFRYVNRKVLRNAPCSVGILVDRGLGTVEKISRSYASLNVAVIFISGKDDREALAYAARVARHPGVKLSVIRFLVDAAAENAARRAGTYRISVAEQEEEMRLDDECFATFYERHVAGGHVAYVEKHLASSAETYSTLKLLEGQYALIIVGRGGKVNTVLTFGMNDWQQCPELGPIGDVLSGSEFSVRTSVLVIQQHNLKGELDGLDDDFSIMEMSRNR 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2801676 2805789 + Carg13433-RA Car08g00430 153004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00430 778 Pfam Sodium/hydrogen exchanger family 192 400 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00430 Car-Chr8:2801676 Car20g00913 Car-Chr20:9886724 8.93E-111 dispersed
Car17g00919 Car-Chr17:7545370 Car08g00430 Car-Chr8:2801676 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00430 - - csv:101211645 1339.71