Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00439 ATGGAAACAGGAGAATCTGTGGCAAAGGTTATGAAGAACATGGGTCCCCACACCTGTCAAATATGTGGAGATAACGTTGGGAAGACCATTGAGGGTGAAGTGTTTGTTGCTTGTGATGTTTGCACATTTCCTGTTTGCAGACCATGTTATGAGTACGAGAGAAAAGATGGGAATCAGTCTTGTCCTCAATGTAAAAGCAGATACAAGAGACACAAAGGAAGTCCTGCTGTTCTAGGCGACGAAGATGACGTTGAGCTTGACGACGACGACGCCATTGATTTAAATTACATTTCTGAAAGTCAAAAACAGAAGCAGAAGATTGAGGAGCACATGATGAACTGGCGGATGTCATATGGACAAGCACAAGATCTCCCGCCTCCAAATTATGACAAAGAAGTTTCTTTAAGTCACATTCCCTTGCTCACCAATGGGCAGGTTTCTGGAGAACTTTCAGCTGCATCGCCCGAGCATCATTCAATGGCATCTCCCGGACATCCTCGTGGGAAGCCGATATATTCTCTTTCGTACGCAGCTGATATCAACCAATCACCTAATGTGCGAGACGTGGACGCTACAAAGGAGTATAATTCATCAGGGCTAGGCAACGTAGCTTGGAAAGAGAGAGTCGATGGCTGGAAGATGAAACAAGAGAAGAATGCTGTTCCAATGAGCACAGCCCATGCTGCATCTGAAAGGGGAGGTGGAGATATCGATGCCTGCACGGACGTGCTTGTCGATGATTCCTTATTAAACGATGAAGCTCGTCAGCCTCTCTCGCGAAAGGTTTCTATTCCATCATCAAGGATAAACCCTTACCGATTGGTGATTGTTCTTCGGCTCGTGATTATTTGCTTTTTCTTGCACTACCGAATAACGAATCCTGTACGTAATGCATACGCTCTATGGCTGGTATCTGTTATATGTGAGATCTGGTTTGCAATATCCTGGATATTAGATCAGTTTCCGAAGTGGTTTCCTGTAAACCGTGAGACATATCTCGATCGGCTTGCATTAAGATATGATAGGGAAGGAGAACCGTCACAGCTTGCTGCTGTTGACATTTTCGTGAGTACAGTTGACCCACTGAAGGAGCCTCCACTTGTCACAGCCAACACTGTGCTATCCATTCTCGCTGTTGACTACCCCGTTGACAAGGTCTCGTGCTACGTCTCTGATGACGGAGCTGCCATGTTGACATTTGAAGCATTATCTGAGACATCAGAGTTTGCAAGGTCATGGGTGCCTTTCTGCAAGAAGTACAGCATTGAGCCTCGGGCTCCCGAATGGTACTTCGCTCAGAAAATTGATTACTTGAAGGATAAAGTTCATCCGTCGTTTGTCAAAGATCGAAGAGCGATGAAGAGAGAATACGAGGAGTTTAAGGTTCGGATCAACGGCCTGGTATCGAAGGCGCAGAAGGTTCCCGAAGAAGGATGGATTATGCAAGATGGAACGCCATGGCCCGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGCCAGAACGGTGGACTGGATTCTGAAGGTAACGAGTTGCCTCGATTAGTCTATGTATCTCGTGAAAAACGTCCAGGATTCCAACATCATAAGAAAGCCGGTGCAATGAACGCTCTTGTTCGGGTGTCAGCTGTTCTTACGAATGGCCCATTCTTGTTGAATCTCGACTGTGATCACTACATAAACAATAGCAAGGCGTTGAGGGAAGCAATGTGTTTCATGATGGATCCAAACCTAGGAAAATATGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATCGATAAGAACGATCGATACGCCAACCGTAATACTGTTTTCTTTGATGTAAGTTATTCCTGTGCTCTTCTTTTAATTCAAGTAGTCCATTTGGGTTCTCATTCTTCCTTTGATTTCATTGTCTCAGATAAATTTAAGAGGTTTAGATGGTATTCAAGGTCCAGTTTATGTGGGTACTGGATGTGTTTTCAATAG 1986 44.56 METGESVAKVMKNMGPHTCQICGDNVGKTIEGEVFVACDVCTFPVCRPCYEYERKDGNQSCPQCKSRYKRHKGSPAVLGDEDDVELDDDDAIDLNYISESQKQKQKIEEHMMNWRMSYGQAQDLPPPNYDKEVSLSHIPLLTNGQVSGELSAASPEHHSMASPGHPRGKPIYSLSYAADINQSPNVRDVDATKEYNSSGLGNVAWKERVDGWKMKQEKNAVPMSTAHAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRLVIVLRLVIICFFLHYRITNPVRNAYALWLVSVICEIWFAISWILDQFPKWFPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARSWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVSKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGQNGGLDSEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDKNDRYANRNTVFFDVSYSCALLLIQVVHLGSHSSFDFIVSDKFKRFRWYSRSSLCGYWMCFQ 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2852979 2860903 + Carg13442-RA Car08g00439 153013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00439 661 Pfam Zinc-binding RING-finger 9 83 IPR027934 -
Car08g00439 661 Pfam Cellulose synthase 352 618 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00439 Car-Chr8:2852979 Car04g01268 Car-Chr4:7351698 0 dispersed
Car08g00439 Car-Chr8:2852979 Car03g00067 Car-Chr3:811642 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00439 K10999 - csv:101206590 1179.08