Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car08g00481 | ATGGGGACTCCGGTGAATATCATTGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGATGGTCAAGTTACAGATATTAGTGGCAAAAATGCCACCATAATCACCTCCATGGATAAAACTATTGTTGCTCCAATTTCGAGTGTATATCCGAAAGACACGGAGGCGCCGCCGGCTGGGGTTGACGACATGACGAAATTGGCATACCTCCATGAACCTGGAGTTTTGCATAATCTAGCATGTCGATTTTCTCTCAACGAGATATACACTTACACCGGGAATATTCTAATCGCCGTGAATCCTTTCCGGAGATTGCCGCATTTGTATGATATTCACATGATGGAGCAGTACAAAGGAGCTACATTCGGCGAGCTTAGTCCTCATCTTTTCGCAGTTGCAGATGCTTGCTATAGATCGATGATTAACGAGCAAGGAAGTCAGTCCATCTTAGTAAGTGGAGAGAGTGGTGCTGGTAAAACTGAGACAACGAAGATGCTCATGAGATATCTAGCGTTCATGGGAGGCAGATCAGATACAGAAGGAAGAACAGTCGAGCAGCAGGTTTTGGAGTCCAACCCTGTGTTGGAAGCATTTGGAAATGCCAAGACCGTCAAAAACAACAATTCGAGTCGTTTTGGAAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGGGCTGCCATTCGTACGTACCTTCTCGAACGGTCGCGTGTTTGCCAAGTCTCGGATCCTGAGAGAAACTACCATTGTTTTTACATGCTTTGTGCAGCACCACCAGAAGATGTCAAGAAATACAAGTTAGCAGACCCAAGGACATATCGTTATCTTAATCAAACAAATTGTTACGAAGTGGCGAATGTTGATGATTCAAGAGAGTACTTAGAGACGAGAAACGCCATGGATGTTGTAGGAATCAGCCAGGATGAACAGGATGCTATATTTCGTGTTGTAGCTGCAATACTGCATCTTGGAAACATTGAATTCATGAAAGGGAAGGAATTTGACTCCTCCAAAGTGAAAGACGAGAAATCAAACTATCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTAAAGGCATTGGAACATTCACTCTGTCAGCGTGTCATAGTGACTCCTGATGGGAAAATTACAAAGCCATTGGACCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTGTATTCAAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCGAGCTTAATTGGTGTGCTTGATATTTATGGATTTGAAAGCTTCAAGGTCAATAGTTTTGAGCAGCTTTGCATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAGGAGTACACGAAAGAAGAAATTAACTGGAGCTATGTTGAGTTTGTGGATAATCAGGATGTCCTTGATCTCATTGAGAAGAAACCTGGAGGTATCATTGCCCTGCTTGATGAAGCCTGCATGTTTCCAAAGTCGACACATGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGGACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAAACTTCACAATAAACCATTATGCTGGAGATGTTACATACCAAGCAGACCTATTTCTAGATAAAAACAAGGACTATGTAGTAGCAGAACATCAGGCTCTTCTGAATGCCTCACAATGCTCTTTTGTTGCAAATCTTTTCCCTCCACTTCCTCAGGAGAGCTCAAAGCAATCTAAGTTTTCCTCTATTGGTACTCGGTTCAAGCAACAACTCCAAGCTCTCATGGAAACATTGAATACTACAGAACCACATTATATCAGATGTGTGAAGCCCAACACAGTCTTGAAGCCTGGAATCTTTGAAAACTTCAATGTGTTGAACCAATTGAGATGTGGGGGAGTTCTCGAGGCAATTAGAATTAGCTGTGCAGGATATCCAACGAAAAGAACATTTGATGAGTTCCTTGATCGTTTTGGAATGCTTGCTCCAGATATTTCAGACGGGACTGATGAAAAATCAGCATGCATGGCAATATGCGACAGAATGGGCTTAAAGGGTTATCAGATTGGAAAAACAAAAGTGTTTCTGAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATATTGGCCAATGCTGTCAGACGCATCCAGCGGCAAATTCGAACCCTTCTAACTAGGAAAGAGTTTCTCACCATGAGGAGAGCTACAATTCATATGCAGAAACATTGGAGAGCACAACTTGCTCGTAAGCTATATGAGAAAATGAGGAGAGAAGCTGCTTCAATCCGTATACAGAAGCATGCACGTGCTCATGCAGACAGAAAAGCTTACACAAAATTACTTGCGTCAGCTATAGTTATTCAAACTGGTATGCGAGCAATGGCCGCTAGAAATGAGTTCAGACACAGAAGAAGAACAAAGGCAGCTATTATTGTTCAGACTGAATGGCGAAGGGCATCAGCTATTTCAGCTTACAAACAGCAGCAGAAGGCAACTCTTGCCCTTCAATGCCTCTGGCGAGCTAAAGTTGCAAGGAAAGAGCTTAAAAAACTAAAGATGGCTGCAAGAGAAACAGGGGCACTCAAGGAGGCCAAGGACAAATTGGAGAAGCGTGTCGAGGAGCTAACGTGGCGCCTGGAATTTGAGAAGCACCTGAGGATGGATGTTGAAGAAGCCAAGGGGCAAGAAGTTGCAAAGTTACAAAGTGCTTTGGAAGAAATGCAAGGGCAGCTGGATGAAGCCAATGCTGCAATCATACGTGAGAGAGAAGAAGCAAAATTGGCCATAGAACAAGCTCCACCGGTCATTAAGGAAGTGCCCGTGGTTGATGAGACCAAGCTGGAAATGCTGAGAAATCACAATGAAGAACTTGAGGGGGTGGTTGGAGAGCTGAAGAAGAAACTTGAGGAATTCGAAGAAAAGTTTGCTGAAGTAGAAAAGGAAAGTAAAGCTACACTCAAGGAGGCAGAAGAGGCACAATTGAAATCAATGCAGCTTCAGGAGACTATTGAGAGATTGGAATCAAATTTATCTAGCCTCGAGTCCGAGAACCAGGTTCTACGTCAGCAGGCTTTGGTTGCTGCAGACAATGAATCCCTCTCTGATGAACTGCAAGCCCTCAAGAGTAAGATCGGAAGTCTAGAGGCGGAGAATGAAGTTCTTCGCAACCGGACAGTAGTTGTTGAGCACGTGTCTATTCCTGCAGGGGTGCTTGCAGAAAGCAAGCCTTTGGATAACGGGAAGGCTTTAGATAACGGGCAGGCTTTAGATAACGGGCATATTGTGGAAGAAGAGATTAAAGCAACTAAGGAGATTAAAGCAACTAAGGAACCACCTGTTGTTCCCGTCCTAGCTAAGCAAGGCTCGCTCACAGAAAAGCAACAGGAAAATCATGATGTCCTGCTCAAGTGCTTAGCAGAAGACAAACGTTTTGACAAAGGCAGACCAGTTGCAGCTTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAAGCAGATAAGACCAATATATTCGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGTGACCTTGCATATTGGCTTTCAACCACTTCTACCCTTTTCTATCTTCTTCAAAGTTCACTCAAGGCAGCCAATACAAGTACTGCAGCTTCACATCGCAACCGTACTTCCCCTTCAACCTTATTTGGTCGTATGGCATATGGTCTTCGATCATCTTCTATGGGTATGGGAATTTCCAGTGGATACAGTGGAATGGTGGGAAAGACAAACAATCAATCTAAAGTTGAAGCCAAGTACCCAGCATTGCTTTTTAAGCAACATTTGGCAGCATGCATTGAAAAATTGTTTGGGATGATACGTGATAACTTGAAGAAAGAAATTAGCCCTTTCTTGCATCTATGCATACAGGCACCAAGATCAGTGAGGGCCAGATCAATAAGAGGGTCATCTAAAAATATCCATTCAAATATTGTTGCAAAACAACAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAATCTAGACCAGACCTTGGTTATAATGTCTGAAAATCATGTTCCCTCCATGATCATGAGAAAAATCTTCCTTCAGGTTTTCTCATTCATAAATGTCCAGCTCTTCAATAGCTTGTTACTACGACGTGAGTGCTGTTCCTTCAGTAATGGAGAGTATTTAAAGTTAGGTCTGCAGGAGTTGGAGCAATGGTGTACTAAAGCTACTGATACGTATGCTGGCTCTTCCTGGAATGAACTTCAACACATAAGACAGGCAGTAGGATTTCTGGTGTTACACCAGAAGTCCCAGAAAAGTTTGAATGAGATAACAGATGAATTGTGCCCGATTCTGAGCATCCCGCAAATATATCGCATAGGAACGATGTTCTGGGACGACAAATATGGAACTCAGGGGTTATCTCCTGATGTAAGT | 4515 | 42.68 | MGTPVNIIVGSHVWVEDPEDAWIDGQVTDISGKNATIITSMDKTIVAPISSVYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGATFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLADPRTYRYLNQTNCYEVANVDDSREYLETRNAMDVVGISQDEQDAIFRVVAAILHLGNIEFMKGKEFDSSKVKDEKSNYHLQTAAELLMCDVKALEHSLCQRVIVTPDGKITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKVNSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTNFTINHYAGDVTYQADLFLDKNKDYVVAEHQALLNASQCSFVANLFPPLPQESSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGTDEKSACMAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTLLTRKEFLTMRRATIHMQKHWRAQLARKLYEKMRREAASIRIQKHARAHADRKAYTKLLASAIVIQTGMRAMAARNEFRHRRRTKAAIIVQTEWRRASAISAYKQQQKATLALQCLWRAKVARKELKKLKMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQSALEEMQGQLDEANAAIIREREEAKLAIEQAPPVIKEVPVVDETKLEMLRNHNEELEGVVGELKKKLEEFEEKFAEVEKESKATLKEAEEAQLKSMQLQETIERLESNLSSLESENQVLRQQALVAADNESLSDELQALKSKIGSLEAENEVLRNRTVVVEHVSIPAGVLAESKPLDNGKALDNGQALDNGHIVEEEIKATKEIKATKEPPVVPVLAKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEADKTNIFDRIIHTIRSSIESQENISDLAYWLSTTSTLFYLLQSSLKAANTSTAASHRNRTSPSTLFGRMAYGLRSSSMGMGISSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVRARSIRGSSKNIHSNIVAKQQASSIHWQSIVNNLDQTLVIMSENHVPSMIMRKIFLQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCTKATDTYAGSSWNELQHIRQAVGFLVLHQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDVS | 1505 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3048381 | 3058153 | - | Carg13484-RA | Car08g00481 | 153055 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car08g00481 | 1505 | ProSiteProfiles | Dilute domain profile. | 1199 | 1505 | IPR002710 | - | |
Car08g00481 | 1505 | Coils | Coil | 876 | 910 | - | - | |
Car08g00481 | 1505 | Pfam | Myosin head (motor domain) | 64 | 719 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car08g00481 | 1505 | ProSiteProfiles | IQ motif profile. | 757 | 786 | IPR000048 | GO:0005515 | |
Car08g00481 | 1505 | ProSiteProfiles | IQ motif profile. | 805 | 834 | IPR000048 | GO:0005515 | |
Car08g00481 | 1505 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Car08g00481 | 1505 | ProSiteProfiles | IQ motif profile. | 782 | 808 | IPR000048 | GO:0005515 | |
Car08g00481 | 1505 | ProSiteProfiles | IQ motif profile. | 853 | 882 | IPR000048 | GO:0005515 | |
Car08g00481 | 1505 | Pfam | DIL domain | 1390 | 1493 | IPR002710 | - | |
Car08g00481 | 1505 | Coils | Coil | 922 | 956 | - | - | |
Car08g00481 | 1505 | ProSiteProfiles | IQ motif profile. | 734 | 761 | IPR000048 | GO:0005515 | |
Car08g00481 | 1505 | ProSiteProfiles | Myosin motor domain profile. | 62 | 731 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Car08g00481 | 1505 | Coils | Coil | 972 | 1048 | - | - | |
Car08g00481 | 1505 | Coils | Coil | 1055 | 1082 | - | - | |
Car08g00481 | 1505 | Pfam | Myosin N-terminal SH3-like domain | 9 | 48 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Car08g00481 | 1505 | Pfam | IQ calmodulin-binding motif | 855 | 874 | IPR000048 | GO:0005515 | |
Car08g00481 | 1505 | Pfam | IQ calmodulin-binding motif | 758 | 777 | IPR000048 | GO:0005515 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car08g00481 | Car17g00866 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car05g00347 | Car-Chr5:1988431 | Car08g00481 | Car-Chr8:3048381 | 0 | dispersed | |
Car08g00481 | Car-Chr8:3048381 | Car10g00670 | Car-Chr10:3442085 | 0 | dispersed | |
Car17g00866 | Car-Chr17:7298666 | Car08g00481 | Car-Chr8:3048381 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car08g00481 | K10357 | - | csv:101207221 | 2704.47 |