Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00491 ATGAGTGGTGACAAGAAGACGATCATTCAACGCCAAACTTCCTATAATCCTCTCTATGTTAATCCCCTTACTGACCTCCGGCACAACCGTAGCTGTAGCGACGGCGGATTCCGGCAAGGTAAGGAAAACTTGACACCCAATACGAAGGAGAAACAGAGCGATGAAAATGGAGTGCTCTGCGACAAAGAAAACGCGAATCCGAGTAATGGGTCTTGTGCTAATCCTAAGAAATTTGGGGATTTCAAGTCGTTTTCGACTGGGAAGGCGTTGAAGCCTTCGTCGCTTCATCTGTGTATGCAGATGAATGAACCAGATAAGATTTTTGGGTCTAGGTTGTGGGAGGGGACTGATTCAGAGCACTCGAGTTCGTTGAAGATTTGGGACTTTTCGGATTCTGAAGCTGCTCCAGCTTCTTCCTGGTCCACATTGCCTAACAGGTCGTTGTTGTGTAGGCCATTGCCTGTGGATGTGGGGAGATGTACCTGTGTCATTGTGAAGGAGAAGTCACCGGATGGGCTTCGTGGTGGTGCTTTCTATTCTCTCTATACCAATGAAGGGAAGGGAAGGCAGGATCGGAAGTTGGCGGTGGCTCGGCATCGACGACGGAATGGGAGGTCAGAGTATAAAATAGCTCAGAGTGCAAGAGGGATATTGTGCAATGCAGATGATAGTTTTGTTGGATCCATGACTACAAACCTTGTTGGTTCGAAATATCATATATGGGATCAGGCGAGCCGACTGAAACCCATCCCGAGCCAGTCGAAATCGCTTCTTGCTGCTGTAACATTCATGCCTACAATAACCACTTGGACAGGCAGTCATAGAAGCATGAAGGCTTTCATCCCCAAGCATCAAACAATTCAGCTGAAGAACACCAATCAGGTGCAGCACATCGCAGGGCTGCCAAGGGAGTGGGAGGAAGAAAAGACCAAAGTCCACCAACTTGTTTCTAGAGTTCCTCAATACAACAAGATTTCTAAGCAATATGAGTTGGACTTCAGAGACAGAGGAAGAGCAGTTTCAGGTCTTATGATCCAAACCTCTGTGAAGAATTTTCAGTTAACTTTAGAGGAAAATGGCAAGCAAACAATTCTCCAACTTGGAAGGATTGGGAAGTCCAAGTATGTGATGGATTATAGGTATCCATTGACAGGTTACCAAGCATTTTGCATATGCCTGGCTTCCATAGATTCAAAGCTTTGTTGCTCAGTATGA 1215 46.09 MSGDKKTIIQRQTSYNPLYVNPLTDLRHNRSCSDGGFRQGKENLTPNTKEKQSDENGVLCDKENANPSNGSCANPKKFGDFKSFSTGKALKPSSLHLCMQMNEPDKIFGSRLWEGTDSEHSSSLKIWDFSDSEAAPASSWSTLPNRSLLCRPLPVDVGRCTCVIVKEKSPDGLRGGAFYSLYTNEGKGRQDRKLAVARHRRRNGRSEYKIAQSARGILCNADDSFVGSMTTNLVGSKYHIWDQASRLKPIPSQSKSLLAAVTFMPTITTWTGSHRSMKAFIPKHQTIQLKNTNQVQHIAGLPREWEEEKTKVHQLVSRVPQYNKISKQYELDFRDRGRAVSGLMIQTSVKNFQLTLEENGKQTILQLGRIGKSKYVMDYRYPLTGYQAFCICLASIDSKLCCSV 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3119586 3123170 - Carg13494-RA Car08g00491 153065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00491 404 MobiDBLite consensus disorder prediction 32 58 - -
Car08g00491 404 Pfam Tub family 150 398 IPR000007 -
Car08g00491 404 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00491 Car-Chr8:3119586 Car07g00424 Car-Chr7:2158858 4.48E-14 dispersed
Car08g00491 Car-Chr8:3119586 Car14g01476 Car-Chr14:12260396 2.69E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3965 PF01167 Tub 2.90E-45 CL0395 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00491 K19600 - csv:101216780 751.51