Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00496 ATGATTATCACCGTGAAGGATTCGACGATGGTGAGACCAGCGGCGGAGACACCGCGCCGGAGTCTCTGGAACTCGAACGTCGATCTGGTGGTGCCGAGTATCCACACGCCGAGCGTCTACTTCTACCGACCAACCGGTGCTTCCAATTTCTTCGACAGTCAGATTCTCAAGGATGGCCTAAGCAAGGCGCTGGTGCCGTTCTATCCAATGGCTGCACGGTTACGGCGCGATGAGGACGGTCGAATCGAGATCAATTGTAACGCCGAAGGTGTGCTTCTTGTCGAGGCTGAGACGACGGCAGTTATCGATGATTTCGGTGATTTCACGCCGACTTTGCGGCTCCGACAACTTATTCCGGCCGTCGATTATTCCGGCGGAATCGAATCGTATCCGTTGTTGGTGTTACAGGTGACTCACTTCAAATGCGGAGGAGTTTCGCTCGGCGTTGGGATGCAACACCACCTAGCCGATGGCTTCTCTGGTCTCCACTTCATCAACACTTGGTCCGACATGTCGCGCGGCCTCGACCTGAAGCTCTCACCATTCATCGACCGGAGCCCTCTCCGAGCACGGGATCCACCTCAACCAATTTTTCGACATGTCGAATACCAACCGGCTCCGCCCATGAAGACCCCGGTCGAACCCGACCCAGAAGGTACCACCGTCTCCACCTTCAAATTGAGCCGCGAGCAGCTCAATCTACTCAAAGCCAAATCCAAGGAAAACGGCAACACTACCAACTACAGCTCCTACGAGATGCTCTCTGCCCACGTCTGGCGGTGCACGTGCAAGGCACGTAACCTGCCGGAGGATCAGGACACTAAGCTCTACATTCCCACCGACGGCCGTGCCCGGTTACGCCCGCCGCTTCCCAACGGCTACTTCGGTAACGTAATCTTCACGGCGACGCCGGTAGCCGTCGCAGGGGAACTGATGTCGAAACCGACATGGTTCGCCGCTAGCAAGATCCACGAAGCTTTGATTCGGATGGACAACGATTATTTGAGATCAGCTTTGGACTATCTCGAGGTTCAGCCGGACTTATCGGCGTTGGTTCGTGGGGCTCATACTTTCCAGAATCCGAATTTGGGGATCACGAGCTGGGTCCGGCTTCCGATTCACGACGCCGATTTCGGGTGGGGCCGGCCGATTTTTATGGGCCCTGGCGGAATTGCGTACGAGGGATTGTCGTTTATAATCCCGAGTGCTTCCGACGACGGCAGCTTATCGGTTAACCGGAGGACTGTTACAGACGGCGGTGGATTTTTCCGGTACGGCGGAAGAAGTTTGAAAGAATGGTAG 1302 55.68 MIITVKDSTMVRPAAETPRRSLWNSNVDLVVPSIHTPSVYFYRPTGASNFFDSQILKDGLSKALVPFYPMAARLRRDEDGRIEINCNAEGVLLVEAETTAVIDDFGDFTPTLRLRQLIPAVDYSGGIESYPLLVLQVTHFKCGGVSLGVGMQHHLADGFSGLHFINTWSDMSRGLDLKLSPFIDRSPLRARDPPQPIFRHVEYQPAPPMKTPVEPDPEGTTVSTFKLSREQLNLLKAKSKENGNTTNYSSYEMLSAHVWRCTCKARNLPEDQDTKLYIPTDGRARLRPPLPNGYFGNVIFTATPVAVAGELMSKPTWFAASKIHEALIRMDNDYLRSALDYLEVQPDLSALVRGAHTFQNPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVNRRTVTDGGGFFRYGGRSLKEW 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3145217 3146920 - Carg13499-RA Car08g00496 153070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00496 433 Pfam Transferase family 2 411 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00496 Car-Chr8:3145217 Car10g00033 Car-Chr10:150325 9.64E-84 dispersed
Car14g00065 Car-Chr14:372217 Car08g00496 Car-Chr8:3145217 9.95E-30 dispersed
Car15g00133 Car-Chr15:743228 Car08g00496 Car-Chr8:3145217 3.13E-10 dispersed
Car02g00116 Car-Chr2:704151 Car08g00496 Car-Chr8:3145217 2.56E-12 transposed
Car04g01249 Car-Chr4:7240503 Car08g00496 Car-Chr8:3145217 2.30E-20 transposed
Car17g00855 Car-Chr17:7216232 Car08g00496 Car-Chr8:3145217 0 wgd
Car08g00496 Car-Chr8:3145217 Car09g00370 Car-Chr9:2030568 1.05E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00496 K13065 - csv:101214857 761.14