Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00507 ATGGCCCGACCTCAACAACGGTATCGCGGTGTTCGTCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTAAAGACGAGAATATGGTTGGGGACGTTCGAGACGGCGGAGGATGCAGCCCGAGCCTACGACGAGGCAGCGAGGCTGATGTGCGGCCCCAAAGCTAGAACTAACTTCCAACTCAATCTCAACGATCAACCCTCCTTTTCTTCTTCCTCCAACCTTCTCTCACCGGCGCTCATAGCCAAACTACACAAATGCCATTTAGCCTCACTCCAAATCGCCAAAAAACACATCCATAAGCAACAACCGGGGTTCGACCTGAACGGCGGTCCTCCACCGAGCATTTCCAGAACCACCACCGGCCAGTGGCCACCGGAAGAAACATGGGTCTACTCCGACGAAGCCCAAATGGAGATCAACAACAACGACAACAACAACATTCCTCATCAGCCATGCCTTCAACCTCTTGAAGATGATCACATTGAACAAATGATTCAAGAGTTGCTAGATCTCGGACCGTTCGAAATCATTACATAG 552 51.27 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQLNLNDQPSFSSSSNLLSPALIAKLHKCHLASLQIAKKHIHKQQPGFDLNGGPPPSISRTTTGQWPPEETWVYSDEAQMEINNNDNNNIPHQPCLQPLEDDHIEQMIQELLDLGPFEIIT 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3192328 3192971 + Carg13510-RA Car08g00507 153081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00507 183 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Car08g00507 183 MobiDBLite consensus disorder prediction 106 130 - -
Car08g00507 183 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00507 Car17g00833 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00302 Car-Chr5:1680751 Car08g00507 Car-Chr8:3192328 4.43E-54 dispersed
Car08g00507 Car-Chr8:3192328 Car11g00423 Car-Chr11:2374062 4.75E-31 dispersed
Car01g00150 Car-Chr1:768968 Car08g00507 Car-Chr8:3192328 4.35E-50 wgd
Car12g00340 Car-Chr12:2145444 Car08g00507 Car-Chr8:3192328 7.24E-51 wgd
Car17g00833 Car-Chr17:7091802 Car08g00507 Car-Chr8:3192328 1.23E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3966 PF00847 AP2 7.50E-12 CL0081 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00507 - - cmo:103499832 276.559