Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00508 ATGAATAATCTTCATGCTATTTTAATCCCCATGTGGGTTTTCTATTTCTTGTTCCTAATGATCGATGCCAGGCCAGAGTTTGCTGGGTTTTCAATTTCTCACATGGTAGCCAAAATGGAAGCTCAATCCCCAGGAGTTCCTGAGGTTATTAGAGTAGTTCATCACCAAGATTTGAACAAGAGAATTCTTGTAGCATTGGTTGTTTCTTCCACTCTTCTTGGAGCTATATTGTTGTTCCTTTTGTGTGTTTGGATATATCGTCGAAGAACGTCGAAACTCGATGATGGAGAATGTCGAAAGGATTTGGTACACCAGCTTATGATGTTGTTTTCTTTCTGTCGATTCGAAGTCGTTTCGAAATCGACGACGATGAACCCCATATCCAGATTTAACTCCTTGAGGTTGGCTAATTTTAAAGGTTCGGTTTCGATGATCGATTATAAACTGTTGGAAGCCGCTACTGATAACTTCAGCAAAAGCAATGTTTTGGACGAGGGTAGTACTGGACATGTTTATAAAGCTCGATTCGATGATAAAATGCTTGCAGCTGTGAAGAGAATCGAGTATGGAGGACCGGATGCTGAACGAAAATTCGAGAATGAGGTGAACTGGTTGTGTAAAATACGACATCAAAACGTAATCAAGCTCTTGGGGCACTGCATTCGTGACGAAACACGGTTTCTTGTTTACGAGATGATGCAGAATGGATCTTTGGAGTCTCAATTGCACGGACCTTCTCATGGATCGGCTTTAACGTGGCATCTCCGAATGAAGATCGCGGTCGACATTGCAAGAGGATTGGAGTATCTTCACGAGCACCGAAGTCCTCCGGTCGTTCACCGTGACTTGAAATCATCGAATATCCTTCTAGATTCGGACTTTAACGCCAAGCTCTCTGACTTTGGCCTTACTGTAAACTTGGGAGCTCAAAATAAGAACATAAAGCTCTCGGGAACGCTCGGATATGTCGCCCCCGAGTACCTTTTAGACGGTAAACTAACTGATAAAAGCGACGTCTATGCTTTCGGAGTCGTTCTTTTAGAGCTTCTGACCGGGAAAAAGCCCGTCGAGAAAATGGGACCTACTCAATCCCAATCTCTAGTTTCATGGGCAATCCCGCAACTTAGCGACCGATCAAAGCTACCGAAAGTTGTCGATCCCGTGATAAGGGACACAATGGATTTGAAGCACTTATACCAAGTTGCTGCTGTAGCTGTGTTATGTGTACAATCGGAACCGAGCTATCGACCGTTGGTTACCGACGTTCTGCATTCCCTGATCCCTCTTGTACCTGTAGAGCTTGGAGGATCACTAAGAATTACCGAACCGCTGCATCTGAAAGAGCCTTCGTCGACCCGCTAA 1362 44.27 MNNLHAILIPMWVFYFLFLMIDARPEFAGFSISHMVAKMEAQSPGVPEVIRVVHHQDLNKRILVALVVSSTLLGAILLFLLCVWIYRRRTSKLDDGECRKDLVHQLMMLFSFCRFEVVSKSTTMNPISRFNSLRLANFKGSVSMIDYKLLEAATDNFSKSNVLDEGSTGHVYKARFDDKMLAAVKRIEYGGPDAERKFENEVNWLCKIRHQNVIKLLGHCIRDETRFLVYEMMQNGSLESQLHGPSHGSALTWHLRMKIAVDIARGLEYLHEHRSPPVVHRDLKSSNILLDSDFNAKLSDFGLTVNLGAQNKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLTGKKPVEKMGPTQSQSLVSWAIPQLSDRSKLPKVVDPVIRDTMDLKHLYQVAAVAVLCVQSEPSYRPLVTDVLHSLIPLVPVELGGSLRITEPLHLKEPSSTR 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3219050 3221760 - Carg23122-RA Car08g00508 153082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00508 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Car08g00508 453 Pfam Protein tyrosine and serine/threonine kinase 160 385 IPR001245 GO:0004672|GO:0006468
Car08g00508 453 ProSiteProfiles Protein kinase domain profile. 157 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00508 Car17g00832 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00306 Car-Chr5:1695027 Car08g00508 Car-Chr8:3219050 1.04E-36 dispersed
Car08g00508 Car-Chr8:3219050 Car11g01583 Car-Chr11:12563543 9.93E-86 dispersed
Car12g00337 Car-Chr12:2131129 Car08g00508 Car-Chr8:3219050 4.79E-158 wgd
Car17g00832 Car-Chr17:7085636 Car08g00508 Car-Chr8:3219050 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89045 PF07714 PK_Tyr_Ser-Thr 2.90E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00508 - - bhj:120085274 754.592