Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00532 ATGGAGATCAAAGAAAAGAAGAGAATTTCAAGCTTCTCCTCCTCTCCATTTATGTCATCATCTTCTTTGATGGCTTTCCTCCTGGTTTTCCTCTGCTTCATCCTTTACGCCCCCGCATCCGCCCTCGGCCCTGCCGGCCCTGGCTCCGGCGCCTCCTTCATTCCTAAAGACAACTTTCTCCTTGACTGTGGTGCCACAAAGGAACTTGGTGCACTCCCTGATGGAAGAGTGTTCAAAACTGATGACCAATCCCTGCAGTTCCTAGATGCCAAGGATGAGATGGTAGCCGCCGCCCCACCGGATACAAACGCACCGTCCCCGGTCGATTTGACAGCCAGAGTCTTCCTCCAAGAAGCTGCTTACCATTTTCAGATGGCTGAGCCTGGATGGCATTGGCTGCGCCTCCATTTCTTGCCTGTTAAAACCAATGACTTTGATCTCTTGGAGGCCAAATTTTCAGTTGTCACTGAAAAGTATGTGTTGCTTCACAGCTTCAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTACTTAATATCACTGAACCAAAACTCTCAATCAAGTTCCTCCCAATGAAGAATTCAGCTGCTTTCATCAACGCCATCGAGGTCGTTTCTGCTCCGGAGGGCATGATCTCCGACTCCAACATGGAGCTGTCTCCGGTCGGGATGGTCGACGGCCTAAGCAAATATGCATTTCAGACAGTGTTTAGGCTGAACATGGGAGGTCCTGTAATCACTCCAAGAAATGACACTCTTGGGAGGACATGGGAGAGAGATGAAGATTACAGGAAACCTTTAGCTGCTGGAAAGAATGTTGCTGTTCAGACCAACAGCATCAAATATCAAGACGGTCTGGAAGAAATTGGGAAGTTAATTGCGCCTCCAAGTGTTTATGCAAGTGCAGTTCAAATGGGAGATGTTCAATCCATGGAACCAAATTTCAATATCACATGGAGATTTGAGGCAGATCCCTCATTTGGGTATCTAATTCGCTTCCATTTCTGTGACATTGTCAGCAAAGTTCTAAACAATCTGTATTTCAATGTTTATGTAAATGGGAAGGCTGCCATAACCAACTTGGATTTGTCACACAAGCTAGGAGTTTTGGCAACTGCATACTACCAGGATCTTGTGATTAATTCTTCCTTCATTGTAGAGGGATTGACAATTCAGATTAGTCCAGCGAACGTCGATACGGGCGATAGGAATGCGATTCTAAATGGGTTAGAGGTAATGAAAATAAGCAATTCTGTTAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAAGTCTGCAAATGGGTCAAACCGTGGCACGGTTGCTGCTGTTGGGTTCGCAATGATGTTTGGGGCGTTTGTCGGGCTCGGTGCGATGGTGATGAAATGGCACAAGAGACCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCATGGTTGCTTCCTGTACATGCTGGTGATTCAAGCTTTATGACAAGCAAGACCTCATATGGTTCACACAAGACCAACACTGGTTTAGGCCTCGGCAGGTTCTTCACTTTGGCAGAGCTGCAAGAAGCCACCAAGAACTTTGATTCCAATGCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGCACCAAAGTTGCTGTAAAAAGAGGAAATCCACAATCAGAACAAGGCATAACAGAGTTCCAAACAGAAATTCAAATGCTTTCAAAGCTAAGACACAGGCATTTGGTTTCTTTGATTGGATACTGTGATGAAAACTCAGAAATGATCTTGGTATATGAGTTCATGTCAAACGGCCCATTCAGAGATCACTTGTATGGAAAGGACTTGTCTCCGTTGTCGTGGAAGCAAAGGCTCGAGATCTGTATCGGATCAGCTCGAGGTCTTCATTACCTCCACACAGGATCAGCACAGGGAATCATTCACCGTGATGTCAAAACAACCAATATTTTGCTCGACGAGAACTTCACTGCAAAAGTTGCGGATTTCGGGCTGTCGAAGGATGCGCCAATGGGGCAGGGACACGTTAGTACTGCAGTGAAGGGGAGTTTTGGATACTTGGATCCAGAGTACTTTAGGAGGCAACAGTTGACAGAGAAATCAGATGTTTATTCGTTTGGGGTTGTTCTACTTGAGGCTTTGTGTGCAAGGCCGGCAATCAACCCATCTTTGACAAGGGAACAAGTGAACTTGGCTGATTGGGCAATGCAGAACAAGAGAAAAGGGACATTGGAAAAGATCATGGATCCTCTTCTAGTTGGAGCCATAAGTCCCGAGTCTATGAAGAAGTTTGCAGAAGCAGCAGAGAAGTGTCTTGCAGAACATGGTGTTGATAGGCCTAGCATGGGGGATGTGCTGTGGAATTTGGAGTATGCATTACAACTTCAAGAGTCGTACTCAAAAGGCAAGACAGAAGAAGAAACCAAACCCGAAGCTACCGCACCTGTCACCCCCACCTCCGCTACTCCTACCGCTGTCGACGATTCGACAGATGCACCAAACTCCGACAACCGCCCTGCTGCCGTGAAGCCAGAACAGAACAGGCAACCGGCAGAGGTCCCAAACCCCATTGATGATCACTCCGGCAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATGA 2646 46.22 MEIKEKKRISSFSSSPFMSSSSLMAFLLVFLCFILYAPASALGPAGPGSGASFIPKDNFLLDCGATKELGALPDGRVFKTDDQSLQFLDAKDEMVAAAPPDTNAPSPVDLTARVFLQEAAYHFQMAEPGWHWLRLHFLPVKTNDFDLLEAKFSVVTEKYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFLPMKNSAAFINAIEVVSAPEGMISDSNMELSPVGMVDGLSKYAFQTVFRLNMGGPVITPRNDTLGRTWERDEDYRKPLAAGKNVAVQTNSIKYQDGLEEIGKLIAPPSVYASAVQMGDVQSMEPNFNITWRFEADPSFGYLIRFHFCDIVSKVLNNLYFNVYVNGKAAITNLDLSHKLGVLATAYYQDLVINSSFIVEGLTIQISPANVDTGDRNAILNGLEVMKISNSVNSLDGEFGVDGKSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNTGLGLGRFFTLAELQEATKNFDSNAIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKDLSPLSWKQRLEICIGSARGLHYLHTGSAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQNKRKGTLEKIMDPLLVGAISPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQESYSKGKTEEETKPEATAPVTPTSATPTAVDDSTDAPNSDNRPAAVKPEQNRQPAEVPNPIDDHSGSAMFAHFSNLNGR 881
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3334465 3337110 + Carg23146-RA Car08g00532 153106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00532 881 Pfam Protein tyrosine and serine/threonine kinase 530 789 IPR001245 GO:0004672|GO:0006468
Car08g00532 881 Pfam Malectin-like domain 61 417 IPR024788 -
Car08g00532 881 MobiDBLite consensus disorder prediction 806 881 - -
Car08g00532 881 ProSiteProfiles Protein kinase domain profile. 526 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00532 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Car08g00532 881 MobiDBLite consensus disorder prediction 819 848 - -
Car08g00532 881 ProSitePatterns Protein kinases ATP-binding region signature. 532 554 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00532 Car-Chr8:3334465 Car09g00807 Car-Chr9:4886675 0 dispersed
Car14g00163 Car-Chr14:761019 Car08g00532 Car-Chr8:3334465 2.97E-71 dispersed
Car11g00169 Car-Chr11:921605 Car08g00532 Car-Chr8:3334465 7.83E-29 transposed
Car17g00766 Car-Chr17:6777947 Car08g00532 Car-Chr8:3334465 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89046 PF12819 Malectin_like 1.80E-37 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00532 - - cpep:111778821 1666.74