Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00573 ATGGGAGTGAACTCCAATCGAGTTGAGAGCTTGGAATGTCGTGAAACGGTGTTGAGAATTCCGCCGGAGGAAATGTCGGCGCCTCCGCAACAGACGGAGGAGATTCACAAAGTCTGCTTGCCGCCTTCGCAGACTACACTTCAGAAACTCAAGCACAAGCTCTCCGAGGTGTTCTTCCCGGATGATCCGTTTTACAGATTCAAGAACCAAACGTGGTTCAGAAAACTGCTTTTAGGCCTTCAATTTCTGTTTCCTATTTTCCAATGGGGACCTGATTATACCCTAGCTCTTTTCAAGTCTGACATCGTTTCTGGTCTCACAATTGCTAGCCTTGCTATTCCTCAGGGAATAAGTTATGCGAAACTTGCGAATTTGCCGCCAATCATCGGTTTATATTCAAGTTTTGTGCCTCCACTGATATATTCTGTTCTTGGAAGCTCTAGACATCTTGCTGTTGGTCCTGTTTCTATCGCCTCTTTGGTCATGGGATCGATGATCACTGAGGCAGTCTCGTTTAATGAACAGCCAACTCTGTTTCTTAAGTTAGCTTTTACAGCCACCTTCTTTGCTGGTGTATTCCAAGCATCTTTAGGTTTGTTAAGGCTAGGCTTTGTCATTGATTTTCTGTCAAAGGCTACTTTAGTTGGGTTTATGGCTGGTGCTGCAGTCATTGTGTCATTGCAACAGCTCAAAGGGTTGCTTGGAATCATCCATTTCACCAACAAAATGCAATTTATTCCTGTCATGTCGTCTGTCTTTCACCACAAAGATGAGTGGTCTTGGCAAACTATTGTTTTAGGCTCCATTTTCCTACTCTTTCTTCTGGGAACGAGACATATAAAAATGAACACAAGTCACAAGAACAATAGTTCTGGTTCTAATTCGTTCTATCGTACACGACTACAGAGTATCAAGAAACCAAAGCTTTTCTGGATTTCAGCAGCTGCTCCACTGACATCAGTTATATTGTCCACTATTTTAGTCTTCCTTCTTAGAGACAAAGTTCCTGGAATCTCAGTGATTGGTCATTTGCCAAAGGGCATCAATCCACCATCTTTGAACATGCTGTACTTTACTGGTCCTCAATTGGCACTTGCCATAAAAACTGGCATTATAACTGGAATTCTCTCGCTGACTGAAGGAATTGCCGTAGGAAGGACGTTTGCTGGTTTGAAAAACTATCAAGTGGATGGGAATAAAGAAATGATGGCCATTGGTTTTATGAACATGGCTGGATCTTGTTCTTCCTGCTATGTCACAACAGGGTCATTTTCTCGATCGGCTGTGAATTATAATGCCGGGGCACAAACAGCAGTCTCAAATGTTGTGATGTCTGCAACCGTGCTCATAACATTGTTGTTTCTGATGCCACTGTTCCATTATACTCCAAATTTCATCCTAGCAGCCATCATTATAACAGCAGTAATTGGGCTAATTGATTACCAAGCAGCCTGTAGGTTATGGAAAGTTGACAAGCTTGATTTCGTAGCTTGTGTTTGTTCTTTCTTCGGCGTTCTTTTCATCTCAGTTCCGTTGGGTCTTGCCATTGCAGTTGGAGTATCTATTTTCAAGATTCTTCTGCATGTCACGAGGCCGAACACCATGGTCTTGGGGAATATTTCTGGGACTCAGATATTCCAAAACATCGACCGATACCGAGAAGCCTCAAGGGTGCCTTCGTTCCTCATTCTTGCCATTGAATCTCCAATCTACTTTGCAAACTCGACATACCTACAAGAAAGGATTCTAAGGTGGATTAGGGAAGACGAAGAGCGAATAAAAGCGACAAACGACAGTCCACTGAAATGTGTAATCCTAGACATGACAGCTGTAACATCCATAGACACAAGTGGTATAGAAGCAGTATGTGAAATTAGGAAGATCTTGATGCAAAAATCACTACAGTTTGTTCTTGCAAATCCAGTTGCAAACGTGATGGAAAAACTGTATAAATCAAAGGCCTTGGAGCAATTCGAGTTCAACGGTCTCTACCTCTCAGTCGGAGAAGCTGTGATGGACATTTCTTCTTTGTGGAAGAGGCAGCCATAA 2049 42.65 MGVNSNRVESLECRETVLRIPPEEMSAPPQQTEEIHKVCLPPSQTTLQKLKHKLSEVFFPDDPFYRFKNQTWFRKLLLGLQFLFPIFQWGPDYTLALFKSDIVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSVLGSSRHLAVGPVSIASLVMGSMITEAVSFNEQPTLFLKLAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIIHFTNKMQFIPVMSSVFHHKDEWSWQTIVLGSIFLLFLLGTRHIKMNTSHKNNSSGSNSFYRTRLQSIKKPKLFWISAAAPLTSVILSTILVFLLRDKVPGISVIGHLPKGINPPSLNMLYFTGPQLALAIKTGIITGILSLTEGIAVGRTFAGLKNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNVVMSATVLITLLFLMPLFHYTPNFILAAIIITAVIGLIDYQAACRLWKVDKLDFVACVCSFFGVLFISVPLGLAIAVGVSIFKILLHVTRPNTMVLGNISGTQIFQNIDRYREASRVPSFLILAIESPIYFANSTYLQERILRWIREDEERIKATNDSPLKCVILDMTAVTSIDTSGIEAVCEIRKILMQKSLQFVLANPVANVMEKLYKSKALEQFEFNGLYLSVGEAVMDISSLWKRQP 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3785602 3789218 + Carg18812-RA Car08g00573 153147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00573 682 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Car08g00573 682 ProSiteProfiles STAS domain profile. 551 674 IPR002645 -
Car08g00573 682 Pfam STAS domain 552 670 IPR002645 -
Car08g00573 682 Pfam Sulfate permease family 98 499 IPR011547 GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00573 Car17g00760 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00292 Car-Chr8:1877463 Car08g00573 Car-Chr8:3785602 5.32E-34 dispersed
Car08g00573 Car-Chr8:3785602 Car17g01133 Car-Chr17:8699382 0 dispersed
Car04g00035 Car-Chr4:159789 Car08g00573 Car-Chr8:3785602 0 transposed
Car10g00559 Car-Chr10:2824542 Car08g00573 Car-Chr8:3785602 0 wgd
Car11g00469 Car-Chr11:2573890 Car08g00573 Car-Chr8:3785602 0 wgd
Car17g00760 Car-Chr17:6724810 Car08g00573 Car-Chr8:3785602 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00573 K17471 - csv:101203079 1171.76