Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car08g00582 | ATGGATTTCTGGCCGGAGTTTCTTGCAACCAGTTGGGGTAAAGAATTTGTCGCCGGTGGCTTTGGTGGCATTGCTGGTATAGTCTCCGGCTACCCACTTGATACTCTTCGAATCAGGCAACAGCGATCCATTTCTGGTTCTGCTTTCAAAATCTTTCGTGATATTATTGCAAACCATGGCCCTGCTGGTCTTTACAGAGGCATGGCTGCTCCCTTGGCCTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAAATCTATGCCGTTCTTTCTCGGGCATTCAACTTCTCCCAATCCAACGGTGACCCTCCGAGCTATAAGGCTGTGGCTCTTGGAGGATTTGTCACTGGAGCTCTTCAGAGCTTCATCCTGTCGCCGGTGGAGCTGGTGAAAATCCGCCTGCAATTGCAAAGTTCTTCTTCTAACAAAGGCCCTGTGAGCGTAGCCAAACGCATCTGCAAAACAGAAGGATTGAGAGGGATTTACAGAGGACTTACCATAACCATGCTCAGAGATGCACCGGCACATGGCATCTATTTCTGGACATATGAGTTCATGAGAGAGCAGTTTCATCCTGGCTGCCGGAAGACCGGCCAAGAGAGTGTCAGCACAATGCTGTTCGCCGGAGGGCTCGCCGGAGTAGGCAGCTGGGTTGTCTGTTATCCCTTAGATGTGTTGAAGACAAGAATTCAGGGTGAGACACAAAGCTCATCTGGAAAGTATAATGGAATTGTTGATTGTCTTGGCAAGAGTGTGAGAGAAGAGGGTTACAGAGTGCTGTGGCGAGGGCTGGGGACTGCGGTGGCTAGAGCATTTGTGGTTAATGGGTCCGTCTTTGCTGCATATGAGATTACTTTGAGGTGTTTGTTTAGCAATCAAGCTCTCTGA | 885 | 49.6 | MDFWPEFLATSWGKEFVAGGFGGIAGIVSGYPLDTLRIRQQRSISGSAFKIFRDIIANHGPAGLYRGMAAPLASVTFQNAAVFQIYAVLSRAFNFSQSNGDPPSYKAVALGGFVTGALQSFILSPVELVKIRLQLQSSSSNKGPVSVAKRICKTEGLRGIYRGLTITMLRDAPAHGIYFWTYEFMREQFHPGCRKTGQESVSTMLFAGGLAGVGSWVVCYPLDVLKTRIQGETQSSSGKYNGIVDCLGKSVREEGYRVLWRGLGTAVARAFVVNGSVFAAYEITLRCLFSNQAL | 294 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 3825606 | 3826579 | + | Carg18803-RA | Car08g00582 | 153156 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car08g00582 | 294 | Pfam | Mitochondrial carrier protein | 200 | 291 | IPR018108 | - | |
| Car08g00582 | 294 | Pfam | Mitochondrial carrier protein | 11 | 94 | IPR018108 | - | |
| Car08g00582 | 294 | Pfam | Mitochondrial carrier protein | 109 | 189 | IPR018108 | - | |
| Car08g00582 | 294 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 103 | 188 | IPR018108 | - | |
| Car08g00582 | 294 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 199 | 287 | IPR018108 | - | |
| Car08g00582 | 294 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 13 | 92 | IPR018108 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car01g00097 | Car08g00582 | CCT | |
| Car08g00582 | Car14g01160 | CCT | |
| Car08g00582 | Car17g00746 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car08g00582 | Car-Chr8:3825606 | Car16g01093 | Car-Chr16:9384902 | 3.21E-48 | dispersed | |
| Car14g00037 | Car-Chr14:223342 | Car08g00582 | Car-Chr8:3825606 | 1.89E-07 | dispersed | |
| Car01g00097 | Car-Chr1:505834 | Car08g00582 | Car-Chr8:3825606 | 1.47E-149 | wgd | |
| Car14g01160 | Car-Chr14:10171679 | Car08g00582 | Car-Chr8:3825606 | 6.84E-150 | wgd | |
| Car17g00746 | Car-Chr17:6665778 | Car08g00582 | Car-Chr8:3825606 | 1.04E-163 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car08g00582 | K15109 | - | csv:101222165 | 489.189 |