Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car08g00630 | ATGTCGTGGCAAACTTACGTCGATGATCACCTCATGTGTGACATTGAGGGCAACCATCTCACCTCCGCCGCCATCATTGGACATGACGCTAGTGTTTGGGCGCAGAGCGCCTCTTTCCCTCAGTTTAAGCCGGAGGAGATTGCAGCGGTTATGAAGGATTTTGATGAGCCTGGATCTCTTGCCCCAACTGGTTTACACCTTGCTGGAACCAAATACATGGTTATCCAGGGCGAGCCTGGAGCTGTTGTTCGTGGCAAAAAGGGCGCTGGTGGAATCACTGTGAAGAAAACAGAGAAAGCTGTGATTATTGGTATATACGATGAACCTGTGACTCCTGGACAATGCAATATGGTGGTGGAAAGGTTGGGAGATTACCTGATCGAACAGGGTCTGTAG | 396 | 49.75 | MSWQTYVDDHLMCDIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSLAPTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVERLGDYLIEQGL | 131 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 4036191 | 4038187 | - | Carg18754-RA | Car08g00630 | 153204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car08g00630 | 131 | Pfam | Profilin | 1 | 130 | IPR005455 | GO:0003779 | |
| Car08g00630 | 131 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car08g00630 | Car14g01139 | CCT | |
| Car01g00075 | Car08g00630 | CCT | |
| Car08g00630 | Car14g01139 | ECH | |
| Car01g00075 | Car08g00630 | ECH | |
| Car08g00630 | Car17g00703 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car08g00630 | Car-Chr8:4036191 | Car12g01245 | Car-Chr12:11761833 | 8.29E-75 | dispersed | |
| Car01g00075 | Car-Chr1:421448 | Car08g00630 | Car-Chr8:4036191 | 4.57E-76 | wgd | |
| Car14g01139 | Car-Chr14:10038186 | Car08g00630 | Car-Chr8:4036191 | 1.35E-76 | wgd | |
| Car17g00703 | Car-Chr17:6453074 | Car08g00630 | Car-Chr8:4036191 | 2.15E-92 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car08g00630 | K05759 | - | fve:101293649 | 243.817 |