Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00653 ATGAAAACTGCTGAAATTTCCTCTGCGATTGCGACTCTGATGGGGTTTCGATCGCTGTTTCTGCTCTTTGGGATTTGTTTTGCTGTTCGTTCTTGCTCTGTCTGTGAATCTTCAGTTATCGTCCCGAACAGGCGAAGCCAAGCGCGTTCTTCGCTCACAGTTATTGTCCTGAACGGTCGAAGCGAAGTGCGTTCTTCGCTCACAGCGACTCGATTAGATGATTCGAGTAGAGCTCCTAGCATTGCACTTCCACCTACCGTACCTGCTAAGAAATGGGGGCACGGTCATGAATTTCGCCATTCAAGAAGGAAGTTTAGAAACAATGCTCCACGGCGTGGTTATCGTGCATCGACTCCGGAGAGTGGCCAGCAAGGCCGTGCTGCTGTCTCTCCAATTCAATCACCATTACCATCTGCAACGAGAGGAAGGTCGCCGAGACCTGCGCCATCGCCAATGATTCCACCGAACCACTATTATGTGCCCATTCCTGCTCCTACAATTTCTCCTATGGGTTCTTACAAGAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCCCCACCTCCTAATGGGGATTGTGCGATATCATGTACCGAGCCACTGACCTATACACCTCCCGGGACGTTGTGTGGTTGTGTGTGGCCAATTCAAGTCAAAATCAGTCTTGATGTTGCAATATACACGTTTTTCCCTCTGGTTTCGGAGCTGGCAGAGGAAATTGCAGACAGTATTGGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCTGATGCTGCTAGTCAGCAGTTAGAAAAAACGACCGTCCTCATCAACTTGGTTCCGAGAGGACCGAAATTCAATGATACCATGGCCTTTTCGATATATCAGAAGTTTTGGCACAGAAAAATATCCATTAACGCTTCGTTATTTGGTCGATATCAAGTCCTGAATGTCAAATATCCAGGTCTTCCGCCGTCTCCTCCGTTACCTCCTTCAGGTACTTCATCCATTAACGATGGCTTGAACACGAGCAATACTAATATTGGAAATGCCATAAAACCTTTGGGAGTCGACGTGCCAAGAAGAAGGAAAGAAGGGCTTAGCGGAAACATGATCGCCGTGATTACTATATCGTCGTTCACTGCCTTTGTTATGTGTGTTGGACTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTTTGCACATCAGGCAGCACAAGTTCCACAAAACTTGATAGCCTCACCTACAAAACCATCAGGCCCTGCTGGATTAATGATGGCTGGAACTGAACCTGGTTCTTCATCCCTGCCTCTCGATGCCGATCCTATGACGTATATAGGAGCTGCAAAGAACTTCACCTTGAAAGATATGAAGAAAGCTACCGACAACTTCGACGTTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTTTACAGTGGCAGTTTGGATGATGGAAGGGAAGTGGCTGTGAAGGTTCTCAAACGACATAATCAACACGGTATTCGGGAATTCTTGGCCGAAGTCGAGATGCTGAGCCGTCTACACCATAGAAATCTAGTTAAATTGATTGGTATCTGTACAGAAGATCAGATTCGCTGCCTTGTTTATGAATTGGTTCCGAATGGAAGCGTCGAATCGCATTTACATGGCATTGACAAGTTAACTGGTCCTCTTGACTGGGATGCTCGGATGAAGATTGCCCTCGGTGCTGCTCGTGGCCTAGCCTATTTGCACGAAGACTCTAATCCTCGAGTTATTCATCGAGATTTCAAAGCTAGCAACATCTTGTTGGAATATGACTTTACAGCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGTTATCTAGCTCCGGAGTATGCAATGACGGGCCACCTTCTTGTAAAGAGCGATGTCTACAGCTATGGTGTTGTCCTTCTCGAGCTACTTACGGGAAGAAAACCAGTTGACTTGTTGCTTCCACCGGGGCAAGAAAATCTTGTTGCTTGGGCTCGACCGCTTCTAACGAGCAAGGAGGGGTTAGATGTAATTACAGACCCAGCTATTAAGTCTGATATCTCTATTGATAGCTTGGCCAGAGTAGCTGCAATTGCTTCTATGTGTGTGCAACCTGAAGTATCTCACAGACCATTTATGGGCGAGGTTGTTCAAGCTCTAAAGCTTGTTTGCAATGAGTTCGAAGAGACAAATGAGGCAGGTTCACGAAGTTACAGCCGAGACGAACTTCTAAGTTACATGGATAGTAAATTTGGAGGAATTTCAGGGGAAATACTAAACGCTACCGACACCTCGCACCCGTTTCCTTCAGAAAAAGAGACGAATGTAGGACTATCGGCATCGGATTTAATCAGCGCATCTGCAAGATTTGAAGGACAGGAATTAGTTTCCTTGAGATGGCATACATCAAATTCAGAACCCTTGAAAATGGGAAGGAAGAGGCAGTTCTGGCAGAAACTAAGAAGTTTATCACGAGGCAGCATCAGTGAACATGGCTTTTCTTCTAAATTTTGGCCTGGATTTCGTTAG 2571 45.82 MKTAEISSAIATLMGFRSLFLLFGICFAVRSCSVCESSVIVPNRRSQARSSLTVIVLNGRSEVRSSLTATRLDDSSRAPSIALPPTVPAKKWGHGHEFRHSRRKFRNNAPRRGYRASTPESGQQGRAAVSPIQSPLPSATRGRSPRPAPSPMIPPNHYYVPIPAPTISPMGSYKKRKKSMPPSQVMMLPPPPPNGDCAISCTEPLTYTPPGTLCGCVWPIQVKISLDVAIYTFFPLVSELAEEIADSIGLNHSQVRIMGADAASQQLEKTTVLINLVPRGPKFNDTMAFSIYQKFWHRKISINASLFGRYQVLNVKYPGLPPSPPLPPSGTSSINDGLNTSNTNIGNAIKPLGVDVPRRRKEGLSGNMIAVITISSFTAFVMCVGLAWLCLLRCRVFAHQAAQVPQNLIASPTKPSGPAGLMMAGTEPGSSSLPLDADPMTYIGAAKNFTLKDMKKATDNFDVARILGEGGFGIVYSGSLDDGREVAVKVLKRHNQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTAKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLLLPPGQENLVAWARPLLTSKEGLDVITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFEETNEAGSRSYSRDELLSYMDSKFGGISGEILNATDTSHPFPSEKETNVGLSASDLISASARFEGQELVSLRWHTSNSEPLKMGRKRQFWQKLRSLSRGSISEHGFSSKFWPGFR 856
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4206690 4213840 - Carg13964-RA Car08g00653 153227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00653 856 MobiDBLite consensus disorder prediction 117 140 - -
Car08g00653 856 MobiDBLite consensus disorder prediction 95 110 - -
Car08g00653 856 ProSitePatterns Protein kinases ATP-binding region signature. 467 489 IPR017441 GO:0005524
Car08g00653 856 MobiDBLite consensus disorder prediction 69 155 - -
Car08g00653 856 Pfam Protein tyrosine and serine/threonine kinase 464 734 IPR001245 GO:0004672|GO:0006468
Car08g00653 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Car08g00653 856 ProSiteProfiles Protein kinase domain profile. 461 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00653 Car-Chr8:4206690 Car14g00853 Car-Chr14:5024085 8.88E-126 dispersed
Car10g00648 Car-Chr10:3304194 Car08g00653 Car-Chr8:4206690 0 wgd
Car11g00576 Car-Chr11:3122182 Car08g00653 Car-Chr8:4206690 0 wgd
Car17g00679 Car-Chr17:6274437 Car08g00653 Car-Chr8:4206690 7.63E-19 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89049 PF07714 PK_Tyr_Ser-Thr 2.00E-47 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00653 - - csv:101219484 1401.34