Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00661 ATGAAAATCGAGTCGATGAGACGGGGAAGGATAAGGGAGAGGATCCGGCGGAGCCATCTCTATACATTCGGTTGCATCCGGTCACAGAGTGCATATGAGGCCGACGATTCGAATCCATTAACAGGACCTGGTTTTTCACGAATTGTCTGTTGTAACCAACCTCATCTCCATGAGAGGCAGCCATTGAAATACTGCTTCAATTACATATCCACAACCAAGTATAATGTTCTTACTTTCTTGCCTAAGGCTCTCTTTGAGCAATTCAGGAGAGTTGCCAATTTGTACTTTCTTTTGGCTGCATTGTTGTCCCTCACACCAGTTGCCCCATTTTCTGCCATGAGCATGATTGCTCCTCTGGTATTTGTTGTTGGTCTCAGTATGGCTAAAGAAGCTCTCGAGGACTGGAGTCGATTCGTGCAGGATATGAAGGTTAATCTCAGGAAAGTGATTGTTCATAAAGGGGATGGTGTTTTTGGTCATAGACCTTGGCACAAGATTCGTGTAGGAGACATAGTGAAAGTAGAGAAGGATCAGTTCTTTCCCGCTGATCTACTTCTTTTGTCGTCGTGCTATGAGGACGGTATATGTTACGTGGAAACGATGAATTTGGATGGCGAGACTAATCTCAAAGTAAAGAGATCTTTGGAAGTAACCTTACCATTGGATGATGATGCTACCTTCAAAGACTTTACTGGAAAGATTTACTGTGAAGATCCAAACCCAAATCTTTACACATTTGTTGGTAACTTGGAGTATGATCGGCAGATTTATCCTCTTGATCCTAGCCAGATTCTCCTCAGAGATTCTAAATTGAGGAACACAGCTTATGCCTACGGGGTAGTGATATTTACTGGACATGATAGTAAAGTCATGCAGAATGCTACAAAATCTCCTTCCAAAAGAAGTAGAATAGAGAGAAAAATGGACAAGATTATTTACATCCTTTTTACCTTACTTGTATTGATATCATCAATGAGCTCAATAGGTTTTGCTGTGAAGACAAAGTACCAAATGACTGACTGGTGGTATTTACAAACTACTGGTGATGATCCACTGTATAACCCTCGTCAGCCAACCTTATCAGGGCTCATACATTTGATCACTGCTCTTATACTCTATGGATATTTGATACCGATCTCGCTCTATGTTTCCATCGAGGTTGTTAAGGTTCTACAAGCTTCCTTCATTAACCAAGATATTAACATGTATTGTGAAGAGACTAGTAATCCCGCTCGAGCTCGGACTTCAAATTTGAACGAGGAGTTGGGTCAGGTAGACACGATCCTATCCGACAAAACTGGCACTTTGACTTGTAATCAGATGGACTTTCTGAAATGTTCCATTGCTGGGACTGCGTATGGTGTTAAATCTAGTGAGGTTGAACTTGCAGCTGCAAGGCAGATGGCATATGACCTTGACGAGCAGGATGCAGATTATTCTGATGTTGTTGTGCAAAAAAATAGCCGACAGTCTTCCATGGCATGGGACCGAAAAGAATCGGAGATTGAATTGGAGACTGTTCTTACTTCAAGTGTTGTCAAAGAGCAGAAGTCTGCCATAAAGTATTTTGGTTTTGAGGACAGCCGTTTAACAAATGGAAACTGGTTGAATGAGCCTAATCATGATGTTCTTCTATTGTTCTTCAGAATTTTAGCAATTTGTCACACTGCAATTCCTGAGCTGAATGAGGAAACTGGTGCTTTTACTTATGAAGCAGAGTCCCCTGATGAAGGTGCTTTTCTTGTTGCAGCAAGAGAATTTGGTTTTGAGTTTTGTAAGAGAACACAATCAACCTTGGTTGTGCGTGAAAGATATCCTTCTCCTAACCAAGTAGTTGAAAGGGAATACAAAGTTTTAAATCTTTTGGATTTCACTAGCAAGAGAAAGAGAATGTCTGTAATTGTTAGGGATGAGTATGGCCATATTATTCTTCTCTGCAAAGGTGCTGATAGCATCATCTTCGATCGACTATCGAAGAACGGAAGAATGTATGAGGAAGCAACCACAAGGCATTTGAATGAATATGGAGAAGCTGGGTTGCGTACTCTGGCACTTGCTTATAGAAAGCTTGAGGAGTCCGAGTATACTGCTTGGAACAACGAGTTTCAGAAGGCTAAAACGTCCATTGGAGGAGATAGAGATGCAATGCTCGAGCGAGTGTCCGACCTCATGGAACGAGAATTAACCCTTGTTGGTGCTACCGCTGTGGAGGACAAGTTACAGAATGGGGTGCCCCAATGCATTGATAAACTTGCACAAGCTGGTCTTAAGATCTGGGTTTTGACTGGAGATAAAATGGAAACTGCCATCAACATAGGATATGCATGCAGTTTACTTCGACAGGGAATGAAGCGGATTTGCATATCAACAAGCTCAGATTCTTTAGCTCAGGAAGGAAAAGAGGCCATGAAAGAATATATTTTGAATCAAATCACCAACGCCTCGCAAATGATCAATCTGGAGAAGGATCCACATGCTGCATTCGCTTTAATCATTGATGGGAAGACTCTAACGTATGCTCTCGAAGATGATATGAAGTTTCAATTCCTTGGACTCGCTGTTGATTGTGCATCGGTCATTTGCTGTCGTGTCTCCCCCAAGCAAAAAGCCCTGGTAGGACTTCCTTCCTGTCATGAACTGTTGATTTCGACTTTTGACCTCTGTTCGGGAGCGTTTCTGCAGGTAACAAGGTTAGTGAAAGAAGGTACTGGGAAAACCACTTTGGCAATTGGTGATGGCGCAAACGATGTGGGAATGATTCAAGAGGCCGATATTGGTGTCGGTATCAGCGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGATTTCTCTATTGCCCAATTTCGGTTTCTTGAAAGGCTTCTGGTAGTCCATGGTCATTGGTGCTACAAGAGGATAGCGCAAATGATATGCTATTTCTTCTACAAGAATATCGCATTCGGATTAACGCTGTTCTACTTCGAAGCATACGCGGGATTTTCTGGGCAATCAATATATGATGATTTCTACATGCTATCATTTAATGTCATACTCACCTCATTGCCTGTAATTTCCCTTGGAGTTTTTGAACAAGATGTCTCTTCTGAGGTGTGCCTACAGTTCCCTGCACTCTATCAGCAAGGCCCCCAAAACTTGTTCTTCGACTGGCCTCGGATTTTCGGATGGATGGGGAATGCTGTCTACTCCTCTATAGTTACTTTCTTCCTCAATCTCATCATCTTCTATGACCAGGCATTCCGCTCAGGCGGCCAAACTGCCGACATGACTGCTGTCGGAACCACCATGTTTACTTGCATCATATGGGCAGTAAATTGCCAGATTGCTCTAACAATGAGCCACTTCACCTGGATCCAACACCTTCTCGTCTGGGGTAGTATCGCCATGTGGTATTTGTTCATCTTACTCTATGGAATGGTGATATCCTCTGGAAATGCATATAAAATATTCGTTGAAGCATTAGGACCTGCCCCTGTTTACTGGGTAGCCACCATCTTAGTAACAATTACCTGCAATCTCCCATATCTTGCCCATATATCCTTCCAGAGAAGCTTCCATCCAATGGATCATCACATAATCCAAGAAATCAAATACTACCGAAAGGATGTGGAAGACACGCACATGTGGACCAGGGAAAGATCAAAAGCAAGGCAAAAAACCAAGATAGGATTCACAGCCAGAGTAGAAGCTAAGATCAGGCAGCTAAAAGGAAAGCTCCAAAAGAAGCACTCTTCCCTTGGAGCTCCTCCAACTGGTACTATTTCATGA 3765 42.71 MKIESMRRGRIRERIRRSHLYTFGCIRSQSAYEADDSNPLTGPGFSRIVCCNQPHLHERQPLKYCFNYISTTKYNVLTFLPKALFEQFRRVANLYFLLAALLSLTPVAPFSAMSMIAPLVFVVGLSMAKEALEDWSRFVQDMKVNLRKVIVHKGDGVFGHRPWHKIRVGDIVKVEKDQFFPADLLLLSSCYEDGICYVETMNLDGETNLKVKRSLEVTLPLDDDATFKDFTGKIYCEDPNPNLYTFVGNLEYDRQIYPLDPSQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILFTLLVLISSMSSIGFAVKTKYQMTDWWYLQTTGDDPLYNPRQPTLSGLIHLITALILYGYLIPISLYVSIEVVKVLQASFINQDINMYCEETSNPARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVKSSEVELAAARQMAYDLDEQDADYSDVVVQKNSRQSSMAWDRKESEIELETVLTSSVVKEQKSAIKYFGFEDSRLTNGNWLNEPNHDVLLLFFRILAICHTAIPELNEETGAFTYEAESPDEGAFLVAAREFGFEFCKRTQSTLVVRERYPSPNQVVEREYKVLNLLDFTSKRKRMSVIVRDEYGHIILLCKGADSIIFDRLSKNGRMYEEATTRHLNEYGEAGLRTLALAYRKLEESEYTAWNNEFQKAKTSIGGDRDAMLERVSDLMERELTLVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICISTSSDSLAQEGKEAMKEYILNQITNASQMINLEKDPHAAFALIIDGKTLTYALEDDMKFQFLGLAVDCASVICCRVSPKQKALVGLPSCHELLISTFDLCSGAFLQVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAYAGFSGQSIYDDFYMLSFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPQNLFFDWPRIFGWMGNAVYSSIVTFFLNLIIFYDQAFRSGGQTADMTAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLLVWGSIAMWYLFILLYGMVISSGNAYKIFVEALGPAPVYWVATILVTITCNLPYLAHISFQRSFHPMDHHIIQEIKYYRKDVEDTHMWTRERSKARQKTKIGFTARVEAKIRQLKGKLQKKHSSLGAPPTGTIS 1254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4250696 4255615 + Carg13956-RA Car08g00661 153235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00661 1254 MobiDBLite consensus disorder prediction 1235 1254 - -
Car08g00661 1254 ProSitePatterns E1-E2 ATPases phosphorylation site. 431 437 IPR018303 -
Car08g00661 1254 Pfam Phospholipid-translocating ATPase N-terminal 51 116 IPR032631 -
Car08g00661 1254 Pfam Phospholipid-translocating P-type ATPase C-terminal 938 1186 IPR032630 -
Car08g00661 1254 Pfam Cation transport ATPase (P-type) 554 658 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00661 Car-Chr8:4250696 Car18g00024 Car-Chr18:114729 0 dispersed
Car17g00671 Car-Chr17:6210955 Car08g00661 Car-Chr8:4250696 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00661 K01530 - csv:101221220 2278.83