Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car08g00663 | ATGGCGGACCGTTCTTCCGATCGCGAAATTGATTCAGGCTTTGATCAGGGCTCACCCCAACCACGTCTTTACAACCCTTACAAGGATCTCCAGGTTCCTTACCGAAACTTCCAGCTTCCAACCTCACCGGAGTTTCTCTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACCGGTTGCGGTTACCTCGCTGGTGCAGTCGGCGGGGCGTCTACAGGCTTCGTCTCCGGCGTCAAATCTTTCGAATCAGGTGATACTATGAAACTTCGGATCAATCGGATCCTGAACTCTTCTGGTCATTCAGGGCGTCTCTGGGGGAATAGGCTCGGTGTGATTGGGTTACTATATGCTGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGACGTGTGGAACTGTGTCGCAGCGGGACTTGGCACCGGTGCGCTTTATCGTGCGGCAAGAGGAGTGAGATCAGCGGCGGTGGCCGGTGCTATTGGCGGCGTTGTGGTTGGAGTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTACGTGCCGATTTGA | 573 | 55.5 | MADRSSDREIDSGFDQGSPQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGFVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGVAVTGKQMLKRYVPI | 190 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 4266168 | 4266740 | - | Carg13954-RA | Car08g00663 | 153237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car08g00663 | 190 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 64 | 173 | - | - | |
| Car08g00663 | 190 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Car08g00663 | 190 | PANTHER | TIM23 | 18 | 190 | IPR045238 | GO:0022857 | |
| Car08g00663 | 190 | PANTHER | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE | 18 | 190 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car08g00663 | Car-Chr8:4266168 | Car12g00815 | Car-Chr12:7823689 | 1.35E-58 | dispersed | |
| Car17g00669 | Car-Chr17:6201454 | Car08g00663 | Car-Chr8:4266168 | 2.29E-119 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car08g00663 | K17794 | - | csv:101221925 | 325.094 |