Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00664 ATGGCTGAAGATGAAACTAACGAATCCGTTACCGCCACCCACACGGTGATCGCCATTAACAGGGATAAGAACAGTCAATCCGCGGTGAAATGGGCTGTGGAACACCTGTTCAATAGGAAGAACTCCGGCGATTGCATCCTCATCCATGTTCGGAGTCAGAGCTTGCATCCCCAGGATGCGGATACGGTTCCTAAGGAGTATCGTCCACCGACTGATGCTGAATTGCATCAGTTCTTCCTTCCATACCGAGGATTCTGCGCACGAAAAGGAATAGTTGCAAAGGAGATTGTCATCCATGACATTGATGTTCCAAGTGCACTTATTCACTATATCAATAAACACTCCATTAGCAACATTGTTGTGGGTGCTTCCAGCCGGAATGCTTTTACGAGGACGTTCAAACATCCAGATGTCTCAACATGTTTGCTCAAATCAACTCCAGAATCATGTTCTGTATATGTCATAGCTAGAGGGAAAGTTCATACTAAGAGATTGAGAAAGCGATACAAGTCACTAACTGATGGGAAAGAAAAACCATCCGGAACTCTTCATACTGACAAGTCTCTATCAAAAATACAAAACACGAAAGATAAAAGCAGGCATCGTTATAGCAACAGTGTTGATTCACTGTCAAGCGTTAGTGACTTTTCAGGGCCTCTCAGTTTCAGATCAACTGGCACATCATCCTCTGAGAGCTTAGATTTTTCGTCAACCTCCTCAGAGAGTAATTCAAAGAGCTTTGTTACCTCTAACACAGCAGCTTCCATAGAATCTGAGATGAGAAAGTTAAGGTTTGAACTCAAAGGGAAGATGGAAATGTATGAATCAGCTTGCAAGGAAGCTCTAGTAGCAAGACAAAAGGCAAATGAACTCGCACAATTGAAGATGAAAGAAGCGAAAAAGTTCGAGCGAGGTAAATCTGCAGAAGAGGTTTTAACAGCATTGTCAGAGCTTGAGAAGCAGAAAAACAAGGCTGGGACAGAAGCAGCTCTAATGGCTCAAAGGCTGGAAGAATTAGAGATCCAGAAAAAGCGAAATATTGCTGAAAACAAGGCTAGGATTGAGGCGGAGGAGAAGCAGAAAACAATTAATTTATTTGAACGCACTAATATCTGCTTCAAACGATACAGAATTGACGAGATCGAAGCAGCAACAGATCATTTTAATGAGTCAAACAAGATTGGTGAAGGGGGTTATGGACCTGTTTACCATGCCTTTCTCGATCATACTTCTGTTGCCATTAAGATGTTGAGCCCAGAGAGATCTCATGGGCAGAGACAATTCCAGCAAGAGATTGAGGTTTTAAGCCGCATGAGGCATCCACACATGGTTCTCCTTATGGGTGCCTGCCCAGAATATGGTTGCCTTGTTTATGAATATATGGAAAACGGGAGCTTAGAAGACCGTCTTTTCCGAAAAGACGACACTCCTCCAATCCCTTGGAAAACTCGTTTCAGGATAGCTGCTGACATTGCCACTGCACTTCTCTTCCTTCATCAAATGAAGCCAGAACCCGTGGTGCATCGTGATCTCAAACCAGCAAACATTCTCCTAGATCAGAACTATGTGAGCAAAATAGGCGATGTGGGTTTGGCCAGGCTAGTCCCGCCGTCGGTTGCTGATAGTGTCACTCAATATCACATGACGGCTGCAGCTGGAACCTTCTGTTACATCGATCCAGAATACCAACAAACAGGAATGCTAGGTGTGAAATCAGATATTTACTCATTTGGTGTTCTGCTACTCCAGCTCATCACTGCAAGGTCACCAATGGGTCTTTCATATCAGGTTGAGGAGTCCATTGAACACGGCACATTCCCACAGATACTTGATCCCACAATTACAGATTGGCCCATTCAAGATACTCTTGGACTCGCTCAATTAGCCCTGAAGTGCTGTGAGCTAAGGAAAAGAGATAGACCCGACCTCGGTACCGTTCTATTACCTGAACTGATCAGGCTAAAAAAATTGGGATTGAGCGGAATACCACCAAAGAGGAAGCTCACAGCTTTTGGGAGAGCACATGGTCAACGCACTTCTAACTCAGCTCCACATTTCAAGGGATCAGAAAATGAGATCAATGTAGGAGAAAGATGGCAGCGACTGACATTCAGTACGAGTTTTTGGAGCCAGAAGGACGGTATTGGTTCGAATACCATTTCTCAGCTGGAAATGGAAAATTGGAGCTCGAAGAACAACAGCGGTGCAGAAGTCTCAACCATACCACTGAGTGGAAACCCAATTGTAGAACTGAGGAAGCGGCGGCACATCAGTGAACGCTGTTGGTCATGTGTAAGTTGTGTTTCTCCTACTACTTCTGGGTTGAAAAACCCACACTCATTTGCATAA 2349 44.27 MAEDETNESVTATHTVIAINRDKNSQSAVKWAVEHLFNRKNSGDCILIHVRSQSLHPQDADTVPKEYRPPTDAELHQFFLPYRGFCARKGIVAKEIVIHDIDVPSALIHYINKHSISNIVVGASSRNAFTRTFKHPDVSTCLLKSTPESCSVYVIARGKVHTKRLRKRYKSLTDGKEKPSGTLHTDKSLSKIQNTKDKSRHRYSNSVDSLSSVSDFSGPLSFRSTGTSSSESLDFSSTSSESNSKSFVTSNTAASIESEMRKLRFELKGKMEMYESACKEALVARQKANELAQLKMKEAKKFERGKSAEEVLTALSELEKQKNKAGTEAALMAQRLEELEIQKKRNIAENKARIEAEEKQKTINLFERTNICFKRYRIDEIEAATDHFNESNKIGEGGYGPVYHAFLDHTSVAIKMLSPERSHGQRQFQQEIEVLSRMRHPHMVLLMGACPEYGCLVYEYMENGSLEDRLFRKDDTPPIPWKTRFRIAADIATALLFLHQMKPEPVVHRDLKPANILLDQNYVSKIGDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITARSPMGLSYQVEESIEHGTFPQILDPTITDWPIQDTLGLAQLALKCCELRKRDRPDLGTVLLPELIRLKKLGLSGIPPKRKLTAFGRAHGQRTSNSAPHFKGSENEINVGERWQRLTFSTSFWSQKDGIGSNTISQLEMENWSSKNNSGAEVSTIPLSGNPIVELRKRRHISERCWSCVSCVSPTTSGLKNPHSFA 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4268001 4272973 - Carg13953-RA Car08g00664 153238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00664 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Car08g00664 782 MobiDBLite consensus disorder prediction 170 204 - -
Car08g00664 782 Coils Coil 308 342 - -
Car08g00664 782 MobiDBLite consensus disorder prediction 205 253 - -
Car08g00664 782 MobiDBLite consensus disorder prediction 169 253 - -
Car08g00664 782 Pfam Protein kinase domain 388 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00664 782 ProSiteProfiles Protein kinase domain profile. 388 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00664 782 Pfam Universal stress protein family 16 146 IPR006016 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00664 Car-Chr8:4268001 Car09g00466 Car-Chr9:2597386 0 dispersed
Car17g00668 Car-Chr17:6195832 Car08g00664 Car-Chr8:4268001 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89050 PF00069 Pkinase 8.30E-42 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00664 - - bhj:120085014 1125.15