Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00667 ATGAATTTGGGAGCGGCGGAGGAAGAATCGCCGCAGGAGATTCATATCCCTGCCGAAATCGATTGGCAAATGCTTGATAAATCTAAATTCTTCTTTCTCGGTGCAGCGTTGTTTTCAGGCGTTTCGGCGTCTCTTTACCCTATGGTGGTGTTGAAAACTCGTCAACAGGTTGCTTATTCGGAGCTTCCGTGCATCAGAACTGCATTTTCTCTCGTCCGCCATGAAGGTTTTCGTGCTCTGTACAGAGGATTTGGAACTTCTCTGATGGGGACTATCCCTGCTAGGGCTCTGTACATGGGAGCCCTAGAGTGTACAAAGAGCTATGTCGGAACCGCCACTGTTAGAATGGGATTTCCAGAGGCTACTGCCGCTACAATTGCTAATGCAGCCGCTGGATTGAGCGCTGCAATGGCCGCTCAACTCGTATGGACTCCAGTTGATGTAGTGAGTCAAAGACTGATGGTTCAAAGTAGCTCCTCCATTCATTACATCAATGGAATCGATGCGTTTCGAAAGATCCTCAACGCCGACGGTCTCCGAGGACTCTACCGAGGCTTTGGGATATCGATTATGACATACGCGCCATCGAATGCGATGTGGTGGGCTTCTTATTATGTAGCACAGCGGCTGATTTGGGGGGGAATCGGATGCTATCAAGCTAAGAAGGTTGTTGGTGAAGGCAATGACAATGGGGCTAATGTTTACAGGCCAGATTCCAAGACTGTGATGGCAGTACAGGGAGGGAGCGCAGCCATGGCGGGTAGTATCTCGGCTTTGATAACAATGCCTCTTGATACAATCAAGACAAGATTGCAAGTTTTGGATGGGGATGAGAATGGGAGAAGAGGGCCAACAATTGGTCAGACATTGAGAAATTTAGTAAGGGAAGGCGGGTGGGCGGCGTGTTATCGAGGTTTGGCGCCCCGGTGCGCGTCGATGTCGATGTCTGCAACGACAATGATCACCACATATGAACTTCTCAAACGGCTATCAACCAAGAATCAAGAGGGTTTAATAAGCTAA 1023 48.97 MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAYSELPCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALECTKSYVGTATVRMGFPEATAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQSSSSIHYINGIDAFRKILNADGLRGLYRGFGISIMTYAPSNAMWWASYYVAQRLIWGGIGCYQAKKVVGEGNDNGANVYRPDSKTVMAVQGGSAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWAACYRGLAPRCASMSMSATTMITTYELLKRLSTKNQEGLIS 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4286528 4287550 + Carg13950-RA Car08g00667 153241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00667 340 Pfam Mitochondrial carrier protein 38 109 IPR018108 -
Car08g00667 340 Pfam Mitochondrial carrier protein 249 334 IPR018108 -
Car08g00667 340 Pfam Mitochondrial carrier protein 126 211 IPR018108 -
Car08g00667 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 336 - -
Car08g00667 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 210 IPR018108 -
Car08g00667 340 Gene3D Mitochondrial carrier domain 30 337 IPR023395 -
Car08g00667 340 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Car08g00667 340 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Car08g00667 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Car08g00667 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 241 330 IPR018108 -
Car08g00667 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 336 - -
Car08g00667 340 SUPERFAMILY Mitochondrial carrier 23 327 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01330 Car-Chr1:11852113 Car08g00667 Car-Chr8:4286528 2.43E-159 dispersed
Car08g00667 Car-Chr8:4286528 Car09g00305 Car-Chr9:1693339 1.39E-162 dispersed
Car17g00662 Car-Chr17:6132845 Car08g00667 Car-Chr8:4286528 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00667 K15121 - csv:101210602 576.244