Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00668 ATGGATGGAGGTGGCGCAGTGCATAATCGTTCAGTCGAAGATGTTTTCAGTGATTTTAGAGGCCGAAGAAGTGGCGTCATCAAAGCCCTCACCGTAGATGTTGAAGAGTTTTATCAACAATGTGATCCTGAGAAGGAAAATCTATGCTTGTATGGTTTTCCAAATGAAGTATGGGAAGTTAATTTACCTGCTGAAGAAGTACCTCCAGAACTCCCTGAGCCAGCATTGGGTATTAATTTTGCAAGAGATGGTATGCAAGAAAGGGATTGGTTGGCTTTGGTTGCTGTCCATAGCGATTCTTGGTTGCTCTCTGTTGCCTATTATTTTGGTGCGAGATTTGGATTTGATAAAGCTGATAGGAGGCGGCTTTTTAATATGATAAACGATTTGCCAACTGTATTTGAAGTAGTCACTGGTGTTGCAAAGAAACCAGTCAAGGAAAAGTCGTCGAGTGCTAATGGTAGCAGATCCAAGTCCAACTTTAAAACGAGGGAAGCTGAAATCCATGGAATGTATTCAAGGCAACCGCAGTCAAGGGAAGAGCGACAAGGTAAGTGCTTTGCTTTAGACTACTTCAGGTATCCAGTTTTGGGTAACTCTCAATGCCTTCCCTTGTTCCTTATATGTAAAGTCTAG 636 42.3 MDGGGAVHNRSVEDVFSDFRGRRSGVIKALTVDVEEFYQQCDPEKENLCLYGFPNEVWEVNLPAEEVPPELPEPALGINFARDGMQERDWLALVAVHSDSWLLSVAYYFGARFGFDKADRRRLFNMINDLPTVFEVVTGVAKKPVKEKSSSANGSRSKSNFKTREAEIHGMYSRQPQSREERQGKCFALDYFRYPVLGNSQCLPLFLICKV 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4289205 4291997 - Carg13949-RA Car08g00668 153242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00668 211 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00668 Car17g00661 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00668 Car-Chr8:4289205 Car12g00605 Car-Chr12:4025006 1.48E-80 dispersed
Car17g00661 Car-Chr17:6128488 Car08g00668 Car-Chr8:4289205 1.54E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00668 - - csv:101222322 336.265