Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00679 ATGACCATTGAAGATCATATATTGGATTGGTTAGCGGATTCAGTTCCTTTTTTTTCTTCCCCGTTCCCGGATGATTCCTACAACTCTAGCTCTATAAACTGCTATCAATGGTGGGATGAGAACCAAGACATAGGCCAAGATCTGATTAATGGCTGTCTAAGCAGTTCCCCCACCACTGTCAGTACTAAACCACCTAACACTTCCACTTCCCATCACTTGACGCCATCTGATTTGACTAAGAAAAGAAAAGCTCCGGATGATACAGTTCATAAACCATCGCAAATCCAACAGAATCAGAGGAAGAACCAGAACAATCAGAGCAGAAATGGTGCAGATAAAAGCAGTGGAGCTGTTGCAGGTGTTACTGTGATGAAGAAATCAGTGGGGAACAAAAGGAATTCATCAAAAGCCACAGGGAATAACAATAATAATGGGAATAACAAGGAAGGAAGGTGGGCAGAGCAATTGCTAAATCCTTGTGCTAATGCTATCATAAAAGGGGATGCAACAAGAGTACATCACCTTCTTTGTGTTCTTCAAGAGCTCGCCTCGCCCACCGGCGATGCTAACCACCGGCTCGCCGCCTATGGTCTCCGAGCTTTGGCCCATTACCTGTCCTCCAATTCTTCATGTTCTTCTTCTTCTTCCACACTTGCGCCGGTTACTTTTGCTTCGACGGACCCTCGATTCTTTCAGAGGTCGTTGATCAAATTCCACGAGGTGAGTCCATGGTTTGCTTTTCCAAATAACATCGCAAATTCTTCGATTCTCCACATTCTCTCTGAAGAACCAAATCGCTCGCGCAATCTTCACATTCTTGACATCGGGGTTTCTCATGGTGTGCAATGGCCGACGCTGCTCGAGGCCTTAACTCGCCGTTCCGGTGGACCCCCGCCGCTAATTCGCCTCACAGTCATCGCTCCAACCGTCGAACATGATCAAAATGCAGAGACGCCGTTTTCGATTGGTCCACCGGGAGACAACATCTCCTCTCGGCTTCTTAGCTTCGCGAAATCATTAAACATCAATTTACAGATCAACCGCCTCGATAGTCTCTCGCTACTGAGTTTAAATGCGCAAGTAATCGGCAAGTTTCCGGACGAAATCTTAATCGTTTGCGCACAGTTCAGACTCCACCAACTGAAACACTACGCTCCAGACGAAAGATTCGAGTTCTTACAAAACCTAAGAAAGATAGAACCGAAAGCTGTGATTCTAAGCGAAAACAACATGGCATGTAGCTGTACCAACTGCGGAAATTTCGACATCGGATTCACAAGAAAAGTTGAATACCTATGGAGATTCCTGGATTCAACAAGCTCCGCATTCAAAGGTCGAGAAAGCGAGGAAAGAAAGTTGATGGAAGGCGAAGCCGCAAAGGCGTTGAGGAACGAAGGCGAAATGAACGAGGAAATGGAAAAATGGTGCGAAAGAATGAGAAATGCTGGATTTGCAAGAAAGTTGTTCGGTGAAGACACCATTGATACGGCTCGAGCTTCAATGAGAAGGTATGATAACAACTGGGAGATGAGAGTTGATGAGAAAGATGGATGCGTAGGGCTATGGTGGAAAGGGCAACCTGTTTCGTTTTGTTCGTTTTGGAAGTTGGGGATGAAATCCAATGGCGGTTGA 1632 45.77 MTIEDHILDWLADSVPFFSSPFPDDSYNSSSINCYQWWDENQDIGQDLINGCLSSSPTTVSTKPPNTSTSHHLTPSDLTKKRKAPDDTVHKPSQIQQNQRKNQNNQSRNGADKSSGAVAGVTVMKKSVGNKRNSSKATGNNNNNGNNKEGRWAEQLLNPCANAIIKGDATRVHHLLCVLQELASPTGDANHRLAAYGLRALAHYLSSNSSCSSSSSTLAPVTFASTDPRFFQRSLIKFHEVSPWFAFPNNIANSSILHILSEEPNRSRNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLIRLTVIAPTVEHDQNAETPFSIGPPGDNISSRLLSFAKSLNINLQINRLDSLSLLSLNAQVIGKFPDEILIVCAQFRLHQLKHYAPDERFEFLQNLRKIEPKAVILSENNMACSCTNCGNFDIGFTRKVEYLWRFLDSTSSAFKGRESEERKLMEGEAAKALRNEGEMNEEMEKWCERMRNAGFARKLFGEDTIDTARASMRRYDNNWEMRVDEKDGCVGLWWKGQPVSFCSFWKLGMKSNGG 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4354654 4356285 + Carg13938-RA Car08g00679 153253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00679 543 Pfam GRAS domain family 154 535 IPR005202 -
Car08g00679 543 MobiDBLite consensus disorder prediction 127 150 - -
Car08g00679 543 MobiDBLite consensus disorder prediction 75 89 - -
Car08g00679 543 MobiDBLite consensus disorder prediction 55 74 - -
Car08g00679 543 MobiDBLite consensus disorder prediction 55 150 - -
Car08g00679 543 ProSiteProfiles GRAS family profile. 144 535 IPR005202 -
Car08g00679 543 MobiDBLite consensus disorder prediction 90 113 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00679 Car-Chr8:4354654 Car07g00575 Car-Chr7:2915594 2.28E-42 dispersed
Car08g00679 Car-Chr8:4354654 Car03g00831 Car-Chr3:6753922 2.17E-43 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
3980 PF03514 GRAS 1.60E-76 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00679 - - csv:101211590 903.279