Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00684 ATGGCTATCAAAAAGCTCTTCCCTCTAAAATCTCTGCTACCCAGTTGTTTAAAGCCAAAGAAAGTTGCTAAAAGCCCTGAATTTCAATCCTCAAACAAGATATCTTTGAGAAGAATCTTATCAATTTCTGATATGAGTGTTAGATCTTCTCTTTCAATTATTACTGATCTTTCAAATTCTTGTAATGGTTCAAATCTTCAAATTTTTACCTTCAAAGAACTTACTCAAATCACTCAAAATTTCACCAAAGGTAACTATTTGGGAGAGGGTGGATTTGGGCCTGTGTTTAAAGGGTTTATTCCTCACAATTTCAAGCTTGGTTTGAAGAAATCTCAGCATGTGGCTGTCAAGATTTTGGATTTGGATGGCTCTCAAGGCCATAGGGAGTGGCTGGCTGAAGTGTTCTTTCTTGGCCAATTGAGACACCCAAATCTTGTCAATTTGATTGGGTATTGCCTTGAAGATGAACAGAGGCTTCTTGTTTATGAATATATGGAAGGTGGAAACTTAGAGAATTTGTTGTTTAAAGGTTGCTACGTTTCGAATTTGACTTGGTTACAAAGGACGAAGATTGCATTAGGATCAGCTAAAGGCCTTGCTTTCCTTCACGAACCCGAAAAACCCATCATTTTCCGAGATTTCAAGGCTTCGAACATCTTACTCGACTCGGACTACAATCCCAAGCTTTCGGATTTCGGGTTGGCTACGAATGGTCTTGATGAGGACGACACACACGTAACGACTCAAATCATGGGGACAGAAGGGTATGCCGCTCCGGAATATCTCATGACAGGTCATTTGTCGACAATGAGCGACGTGTTTAGCTTTGGAGTGTTTTTATTAGAGTTGTTAACAGGTCGACGAGCAGTCGACAAGAACCGCCCGAGCCGAGAACAGAACTTGGTAGCGTGGGGGAGACATCGTTTAAACGATCAAAACAAACTAGAGAAGATAATTGATCCAAGGCTTGAAGGGAAGTACTCAAATGAAGGAGCTAAAAAATTGGCTGCAATAGCATACCAATGCCTTAGCCATCACCCCAAATGTAGGCCCTCAATGGCCTCGGTGGTCAAAGGATTAGAGGCTGTTCATAGCATGAAAGAGTTTATAACTGAGCCATTTGTGTACATTGTCCCAAGTGAAGACACCAATAAGGTGAACAAGACGGTCGAGATAAAGGAGAAGAGACCAGAGAACCGTTACCAAGACCAAAAAGGTCGCCGATATAGGCCTCGAGTATTGCCATTGAGGTCAAGGTCATGGTCGAGGTCGAGATCGAGATCTAATGGTGTTCATTCTGATACAGCCTTGTACAAAGCTGTTAGAAGCAATTTTACTACCGGATGTTCTTTCTCATAA 1359 41.72 MAIKKLFPLKSLLPSCLKPKKVAKSPEFQSSNKISLRRILSISDMSVRSSLSIITDLSNSCNGSNLQIFTFKELTQITQNFTKGNYLGEGGFGPVFKGFIPHNFKLGLKKSQHVAVKILDLDGSQGHREWLAEVFFLGQLRHPNLVNLIGYCLEDEQRLLVYEYMEGGNLENLLFKGCYVSNLTWLQRTKIALGSAKGLAFLHEPEKPIIFRDFKASNILLDSDYNPKLSDFGLATNGLDEDDTHVTTQIMGTEGYAAPEYLMTGHLSTMSDVFSFGVFLLELLTGRRAVDKNRPSREQNLVAWGRHRLNDQNKLEKIIDPRLEGKYSNEGAKKLAAIAYQCLSHHPKCRPSMASVVKGLEAVHSMKEFITEPFVYIVPSEDTNKVNKTVEIKEKRPENRYQDQKGRRYRPRVLPLRSRSWSRSRSRSNGVHSDTALYKAVRSNFTTGCSFS 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4382033 4383704 + Carg13933-RA Car08g00684 153258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00684 452 ProSiteProfiles Protein kinase domain profile. 81 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00684 452 Pfam Protein tyrosine and serine/threonine kinase 83 359 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00684 Car17g00646 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00684 Car-Chr8:4382033 Car06g00152 Car-Chr6:938348 2.83E-134 dispersed
Car10g00689 Car-Chr10:3575767 Car08g00684 Car-Chr8:4382033 7.48E-153 wgd
Car11g00610 Car-Chr11:3335484 Car08g00684 Car-Chr8:4382033 1.18E-158 wgd
Car17g00646 Car-Chr17:6046593 Car08g00684 Car-Chr8:4382033 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89051 PF07714 PK_Tyr_Ser-Thr 2.50E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00684 - - cmos:111464213 801.201