Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00711 ATGGCTGCTGCTCTTCTTCGAGCACTCGTCCTCTTCTCTCTCCTTCTCCCACTTTATTCTTCTTCTTCTTCCGCCGATGCTTCCAAGAAAACTTTCATTGTGCAGGTTCATGGAGATTCCAAGCCTTCCATTTTTCCAACTCACAAGCACTGGTACGAGTCATCTCTAGCCTCCATCACTTCCAATAAGGCTACAGATGCTACTTCATCTTCTTCCAATGGACCCATCCTTCACACTTACGAAAATGTCTTCCATGGCTTCTCTGCAAAGCTCTCACCTTCTGAGGTTGAGAAGCTTCAAACCCTCCCTCACATCGCCTCCATCATCCCCGAACAGGTTCGCCATCCTCATACAACTCGTTCCCCTGAGTTCCTTGGCCTCAAGACTACCGATAGTGCTGGCTTGCTCAAAGAGTCCGACTTTGGATCTGATCTTGTGATCGGAGTTATCGATACGGGTATCTGGCCGGAGAGGCAGAGTTTCAACGACCGCGATCTGGGTCCTATTCCTTCCAAATGGAAAGGGCAGTGTGTTGCGGCTAAGGACTTTCCAGCCACTTCTTGCAACCGTAAACTTATTGGGGCTCGATTCTTCTGCAGTGGGTACGAGGCCACCAATGGAAAGATGAACGAGACCTCTGAGTACCGCTCGCCTCGAGATTCCGATGGCCATGGTACTCATACAGCGTCCATTGCTGCAGGCCGTTATGTGTTTCCAGCTTCAACTTTAGGCTATGCTCGTGGTAAAGCGGCCGGAATGGCTCCTAAGGCTCGTCTTGCTGCCTATAAAGTCTGCTGGAACGCCGGCTGCTACGACTCTGACATTCTTGCTGCGTTTGATGCTGCCGTTTCCGATGGTGTCGATGTTGTATCACTCAGCGTCGGCGGTGTGGTTGTGCCATACTATCTCGATGCCATCGCTATAGGGGCTTTTAGAGCGGTGGCAGCCGGCGTTTTTGTCTCGGCATCAGCCGGTAACGGTGGTCCAGGTGGGCTAACTGTGACTAACGTAGCACCATGGGTTACAACAGTAGGAGCTGGAACCATGGATAGGGATTTTCCTGCTGATGTTAAATTGGGAAATGGAAGAGTTATACTTGGTACCAGTGTCTACGGCGGACCGGCTTTGGTTCCGGGTCGTTTGTATCCTCTTATTTATGCAGGAACCGAAGGCGGGGATGGGTATTCTTCGTCTCTATGCTTAGAAGGTTCATTAAACCCCAATTCGGTGAACGGAAAGATAGTACTTTGTGATAGGGGCATCAATTCAAGAGCTGCTAAAGGTGAGGTGGTGAAGAAGGCTGGAGGATTGGGAATGATTTTAGCTAATGGGGTCTTTGACGGCGAGGGTTTAGTAGCTGACTGCCACGTACTACCTGCCACCGCCGTCGGTGCAACCGGCGGCGACGAGATTCGTAAGTACATTGCAGAAGCAGTGAAGTCTCAGTCACCGCCAACCGCAACAATTTTGTTCAAGGGAACTCGGCTTGGGGTCAGGCCAGCACCGGTTGTTGCTTCCTTTTCAGCTCGAGGTCCTAATCCAGAGTCCCCTGAAATCGTAAAGCCTGATGTGATTGCGCCTGGTTTGAACATTCTTGCTGCTTGGCCTGATAAAATTGGGCCTTCTGGAATTCCTACTGACAAGCGTGCCATAGAGTTCAACATACTTTCGGGCACGTCCATGGCCTGTCCTCATGTCTCTGGCTTGGCTGCTCTACTTAAGGCCGCACACCCAGGATGGAGTCCAGCAGCTATAAAATCAGCCCTAATGACCACTGCCTATACTTTGGACAACCGGGGTGAGACAATGTTGGACGAATCTTCAGGCAATACGTCCACGGTCTTGGACTTTGGAGCTGGTCATGTTCACCCACAAAAGGCAATGAACCCTGGTTTAATCTATGACCTGAACACATATGATTATGTTGATTTCTTGTGTAATTCCAACTACACCGCTAAGAATATCCAAGTAATTACGGGGAAGATAGCAGATTGTAGCGGGGCAAAAAGGGCTGGCCATACTGGAAATTTGAATTACCCTTCATTGTCTGTGGTGTTTCAACAATATGGTAAGCATAAGATGTCTACACATTTCATAAGAACTGTGACCAACGTTGGGGACGCCAATTCAATCTATAAGGTAACAATAAAGCCACCAAGTGGAATTTCAGTGACAGTGGAGCCAGAAAGGCTGGCGTTTAGAAGGGTTGGGCAAAAGTTGAGCTTTTTGGTTAGGGTCCAAGCAATGGCTGTTAAACTTTCCGCTGGAAGCTCTAGCATGAAGAGTGGCTATGTAGTTTGGACTGATGGAAAGCACGTAGTCACCAGTACTTTGGTTGTCACCATGCAGCAACCTCTGCAGTAG 2364 49.24 MAAALLRALVLFSLLLPLYSSSSSADASKKTFIVQVHGDSKPSIFPTHKHWYESSLASITSNKATDATSSSSNGPILHTYENVFHGFSAKLSPSEVEKLQTLPHIASIIPEQVRHPHTTRSPEFLGLKTTDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPSKWKGQCVAAKDFPATSCNRKLIGARFFCSGYEATNGKMNETSEYRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGKAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVSDGVDVVSLSVGGVVVPYYLDAIAIGAFRAVAAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGRVILGTSVYGGPALVPGRLYPLIYAGTEGGDGYSSSLCLEGSLNPNSVNGKIVLCDRGINSRAAKGEVVKKAGGLGMILANGVFDGEGLVADCHVLPATAVGATGGDEIRKYIAEAVKSQSPPTATILFKGTRLGVRPAPVVASFSARGPNPESPEIVKPDVIAPGLNILAAWPDKIGPSGIPTDKRAIEFNILSGTSMACPHVSGLAALLKAAHPGWSPAAIKSALMTTAYTLDNRGETMLDESSGNTSTVLDFGAGHVHPQKAMNPGLIYDLNTYDYVDFLCNSNYTAKNIQVITGKIADCSGAKRAGHTGNLNYPSLSVVFQQYGKHKMSTHFIRTVTNVGDANSIYKVTIKPPSGISVTVEPERLAFRRVGQKLSFLVRVQAMAVKLSAGSSSMKSGYVVWTDGKHVVTSTLVVTMQQPLQ 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4564134 4566497 - Carg13905-RA Car08g00711 153285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00711 787 Pfam PA domain 383 470 IPR003137 -
Car08g00711 787 Pfam Subtilase family 142 609 IPR000209 GO:0006508|GO:0008236
Car08g00711 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Car08g00711 787 Pfam Peptidase inhibitor I9 31 115 IPR010259 -
Car08g00711 787 ProSiteProfiles Serine proteases, subtilase domain profile. 121 628 - -
Car08g00711 787 Pfam Fibronectin type-III domain 676 780 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00646 Car-Chr7:3282729 Car08g00711 Car-Chr8:4564134 0 dispersed
Car08g00711 Car-Chr8:4564134 Car20g00658 Car-Chr20:3717241 0 dispersed
Car17g00619 Car-Chr17:5824892 Car08g00711 Car-Chr8:4564134 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00711 - - cmax:111494531 1476.46