Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00721 ATGGGGGAAAAGTGGGTGATTGATTTGAGGTGCTCATATGATTCCTGTTCTGTGCAGAGAGGGAGGACGATGGGTTTAGGGAGTAGAGAGAAGACAATGAATTGGAGGTGGATGGAGATGGTTTCTCTCATCGTTCTTTGCATTCTGGGGTTGAAGCTTACCACCATTGAAGCTGCCACAGATCCATCAGATGCCTCTGCTTTAAGAGTTTTGTATACCAGCTTGAACTCGCCCCCTCAGTTAACCCAGTGGAATGCTAATGGCGATGATCCATGTGGACAATCATGGAAAGGGATTACTTGCTCTGGCACACGGGTTACAGAAATAAACTTATCTGGCCTCGCTCTCAGTGGATCGATGGGATACCAACTCGCAAGTTTGACATCGTTAACCAACCTAGATATGAGCAATAACAATATTGGAGGCAGTATAGTCTACCAACTTCCACCATTCCTGCAGAGACTAAATCTTGCTCAAAACAGCTTCACTGAAGGCATCCCTTATTCCATTTCACAGATGACAACTCTTCGATACCTAAATCTCAGTCATAATCAGCTTCAGAATCCATTGATTGATATGTTTGGGCAGCTTACTTCGCTATCCACATTGGATCTGTCTTTCAATGCTATGTCAGGCGAACTGCCTCAGAGTTTTAGCTCGCTTTCGAGCATCAGCACTATGAATTTGCAAAACAATCAGTTCACTGGCACAATTAATGTCCTTGCAAATCTTCCTCTTGATAACCTGAACGTTGAAAACAACCGTTTCTCTGGCTGGATCCCTGAGCAACTCAAAAGCATCAATCTTCAGACAAATGGCAACTCCTGGAACTCAGGTCCTGCACCCCCTCCTCCTCCTGGTACACCTCCAGCAACTAGAAGGAACCGAAGTCACGATTCTGGTGGCAATAGTCCATCAAATGGTGGTTCTGGTGAAGGTCAGAAATCAGGAATTAGTGGTGGTGCCATTGCAGGAATTATCATCTCTGTGCTCGTCGCTGGAGCTGTAGTAGCATTCTTCATTGTTAGGAAGAGATCCAAGAGATCATCATCTGCAGACATTGAAAAGCTCGACAATCAACCCCCGCAACCTCGTCAAATGACTCCAGCACAAGAAATAAAGTCCGAAGAAACTTCCTCCACATTTTATCCAACAACATTTGATACTTCTGCTGCAATTAATCTCAAACCCCCTCCTAGTGATCGTCATAAATCACTTGATGAAGACGACTTTGCTAAAAGAGCTGTTGTCAAGAAGGCTAGTGCAGCTCCTATTAATGTAAAGTCATATTCAATAGCAGACCTGCAATTGGCTACTGGCAGCTTCAATTTTGAAAATCTTCTTGGTGAGGGATCGTTTGGACGTGTTTATCGGGCTGAGTTTGATGACGGGAAGATTCTTGCCGTGAAAAAAATCAATTCGGCTGTACTACCTGGGGACTTATCTGAAGATTTCACCGACATTGTTTCGAAAGTCTCCGAGTTACACCATCCCAATATAACCGAGCTCGTGGGTTATTGCTCAGAGCATGGGCAGCATTTGCTTGTGTATGAGTTCCATAAAAATGGCTCGCTTTATGATTTCTTGCATCATTCAGACGAATACAACCAGCCACTGATATGGAATAGTCGTGTTAAGATTGCTTTGGGAACAGCCCGTGCACTAGAGTATCTTCATGAAGTTTGCTCCCCATCAATTGTTCATAGAAACATCAAGTCTGCTAACATACTGCTGGATGCGGAACTCAGCCCCCACCTCTCTGATTCTGGACTGGAAAGCTTTGTACCAAATGCAGATCAGGCACTGGATCACAATGCAAGTTCAGGATACACTGCCCCCGAGGTCACGATGTCTGGCCTTTATACGCTGAAAAGCGATGTCTACAGCTTTGGAGTAGTCATGTTGGAACTGTTGACTGGGCGCAAACCATTTGACAGTTCAAGACCAAGGACCGAGCAATCCTTGGTTCGATGGGCTACACCCCAGCTTCATGACATTGATGCGTTGACCAAGATGGTCGATCCAGAACTCCAAGGACTATATCCAGTTAAATCACTCTCCCGATTTGCAGATGTGATTGCACTTTGCGTCCAGACCGAACCAGAGTTCAGACCTCCAATGTCGGAAGTGGTCGAAGCATTGGTTCGACTTGTGCAGCGAGCTAACATGAGCAAGAGAACATATGGAAATGATAATGCAGCAGCGTCTCCCAGAGGAGGGGACATGGGTGGGGAGGATACACCATAA 2247 45.39 MGEKWVIDLRCSYDSCSVQRGRTMGLGSREKTMNWRWMEMVSLIVLCILGLKLTTIEAATDPSDASALRVLYTSLNSPPQLTQWNANGDDPCGQSWKGITCSGTRVTEINLSGLALSGSMGYQLASLTSLTNLDMSNNNIGGSIVYQLPPFLQRLNLAQNSFTEGIPYSISQMTTLRYLNLSHNQLQNPLIDMFGQLTSLSTLDLSFNAMSGELPQSFSSLSSISTMNLQNNQFTGTINVLANLPLDNLNVENNRFSGWIPEQLKSINLQTNGNSWNSGPAPPPPPGTPPATRRNRSHDSGGNSPSNGGSGEGQKSGISGGAIAGIIISVLVAGAVVAFFIVRKRSKRSSSADIEKLDNQPPQPRQMTPAQEIKSEETSSTFYPTTFDTSAAINLKPPPSDRHKSLDEDDFAKRAVVKKASAAPINVKSYSIADLQLATGSFNFENLLGEGSFGRVYRAEFDDGKILAVKKINSAVLPGDLSEDFTDIVSKVSELHHPNITELVGYCSEHGQHLLVYEFHKNGSLYDFLHHSDEYNQPLIWNSRVKIALGTARALEYLHEVCSPSIVHRNIKSANILLDAELSPHLSDSGLESFVPNADQALDHNASSGYTAPEVTMSGLYTLKSDVYSFGVVMLELLTGRKPFDSSRPRTEQSLVRWATPQLHDIDALTKMVDPELQGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNAAASPRGGDMGGEDTP 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4628073 4633007 - Carg13895-RA Car08g00721 153295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00721 748 MobiDBLite consensus disorder prediction 270 316 - -
Car08g00721 748 ProSiteProfiles Protein kinase domain profile. 442 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00721 748 MobiDBLite consensus disorder prediction 728 748 - -
Car08g00721 748 Pfam Leucine Rich repeat 173 188 IPR001611 GO:0005515
Car08g00721 748 Pfam Leucine Rich repeat 127 145 IPR001611 GO:0005515
Car08g00721 748 MobiDBLite consensus disorder prediction 350 379 - -
Car08g00721 748 MobiDBLite consensus disorder prediction 293 314 - -
Car08g00721 748 Pfam Leucine rich repeat N-terminal domain 62 102 IPR013210 -
Car08g00721 748 MobiDBLite consensus disorder prediction 355 379 - -
Car08g00721 748 ProSitePatterns Protein kinases ATP-binding region signature. 448 471 IPR017441 GO:0005524
Car08g00721 748 Pfam Protein tyrosine and serine/threonine kinase 443 714 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00721 Car14g01082 CCT
Car01g00018 Car08g00721 CCT
Car08g00721 Car17g00608 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00018 Car-Chr1:92178 Car08g00721 Car-Chr8:4628073 0 dispersed
Car04g00906 Car-Chr4:5174426 Car08g00721 Car-Chr8:4628073 0 dispersed
Car06g00077 Car-Chr6:478346 Car08g00721 Car-Chr8:4628073 4.64E-140 dispersed
Car08g00721 Car-Chr8:4628073 Car15g01289 Car-Chr15:10058747 0 dispersed
Car14g01082 Car-Chr14:9516086 Car08g00721 Car-Chr8:4628073 1.73E-118 dispersed
Car04g01906 Car-Chr4:11252302 Car08g00721 Car-Chr8:4628073 2.07E-65 transposed
Car14g01081 Car-Chr14:9513853 Car08g00721 Car-Chr8:4628073 2.21E-46 wgd
Car17g00608 Car-Chr17:5738112 Car08g00721 Car-Chr8:4628073 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89052 PF07714 PK_Tyr_Ser-Thr 5.90E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00721 - - csv:101213107 1141.72