Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car08g00721 | ATGGGGGAAAAGTGGGTGATTGATTTGAGGTGCTCATATGATTCCTGTTCTGTGCAGAGAGGGAGGACGATGGGTTTAGGGAGTAGAGAGAAGACAATGAATTGGAGGTGGATGGAGATGGTTTCTCTCATCGTTCTTTGCATTCTGGGGTTGAAGCTTACCACCATTGAAGCTGCCACAGATCCATCAGATGCCTCTGCTTTAAGAGTTTTGTATACCAGCTTGAACTCGCCCCCTCAGTTAACCCAGTGGAATGCTAATGGCGATGATCCATGTGGACAATCATGGAAAGGGATTACTTGCTCTGGCACACGGGTTACAGAAATAAACTTATCTGGCCTCGCTCTCAGTGGATCGATGGGATACCAACTCGCAAGTTTGACATCGTTAACCAACCTAGATATGAGCAATAACAATATTGGAGGCAGTATAGTCTACCAACTTCCACCATTCCTGCAGAGACTAAATCTTGCTCAAAACAGCTTCACTGAAGGCATCCCTTATTCCATTTCACAGATGACAACTCTTCGATACCTAAATCTCAGTCATAATCAGCTTCAGAATCCATTGATTGATATGTTTGGGCAGCTTACTTCGCTATCCACATTGGATCTGTCTTTCAATGCTATGTCAGGCGAACTGCCTCAGAGTTTTAGCTCGCTTTCGAGCATCAGCACTATGAATTTGCAAAACAATCAGTTCACTGGCACAATTAATGTCCTTGCAAATCTTCCTCTTGATAACCTGAACGTTGAAAACAACCGTTTCTCTGGCTGGATCCCTGAGCAACTCAAAAGCATCAATCTTCAGACAAATGGCAACTCCTGGAACTCAGGTCCTGCACCCCCTCCTCCTCCTGGTACACCTCCAGCAACTAGAAGGAACCGAAGTCACGATTCTGGTGGCAATAGTCCATCAAATGGTGGTTCTGGTGAAGGTCAGAAATCAGGAATTAGTGGTGGTGCCATTGCAGGAATTATCATCTCTGTGCTCGTCGCTGGAGCTGTAGTAGCATTCTTCATTGTTAGGAAGAGATCCAAGAGATCATCATCTGCAGACATTGAAAAGCTCGACAATCAACCCCCGCAACCTCGTCAAATGACTCCAGCACAAGAAATAAAGTCCGAAGAAACTTCCTCCACATTTTATCCAACAACATTTGATACTTCTGCTGCAATTAATCTCAAACCCCCTCCTAGTGATCGTCATAAATCACTTGATGAAGACGACTTTGCTAAAAGAGCTGTTGTCAAGAAGGCTAGTGCAGCTCCTATTAATGTAAAGTCATATTCAATAGCAGACCTGCAATTGGCTACTGGCAGCTTCAATTTTGAAAATCTTCTTGGTGAGGGATCGTTTGGACGTGTTTATCGGGCTGAGTTTGATGACGGGAAGATTCTTGCCGTGAAAAAAATCAATTCGGCTGTACTACCTGGGGACTTATCTGAAGATTTCACCGACATTGTTTCGAAAGTCTCCGAGTTACACCATCCCAATATAACCGAGCTCGTGGGTTATTGCTCAGAGCATGGGCAGCATTTGCTTGTGTATGAGTTCCATAAAAATGGCTCGCTTTATGATTTCTTGCATCATTCAGACGAATACAACCAGCCACTGATATGGAATAGTCGTGTTAAGATTGCTTTGGGAACAGCCCGTGCACTAGAGTATCTTCATGAAGTTTGCTCCCCATCAATTGTTCATAGAAACATCAAGTCTGCTAACATACTGCTGGATGCGGAACTCAGCCCCCACCTCTCTGATTCTGGACTGGAAAGCTTTGTACCAAATGCAGATCAGGCACTGGATCACAATGCAAGTTCAGGATACACTGCCCCCGAGGTCACGATGTCTGGCCTTTATACGCTGAAAAGCGATGTCTACAGCTTTGGAGTAGTCATGTTGGAACTGTTGACTGGGCGCAAACCATTTGACAGTTCAAGACCAAGGACCGAGCAATCCTTGGTTCGATGGGCTACACCCCAGCTTCATGACATTGATGCGTTGACCAAGATGGTCGATCCAGAACTCCAAGGACTATATCCAGTTAAATCACTCTCCCGATTTGCAGATGTGATTGCACTTTGCGTCCAGACCGAACCAGAGTTCAGACCTCCAATGTCGGAAGTGGTCGAAGCATTGGTTCGACTTGTGCAGCGAGCTAACATGAGCAAGAGAACATATGGAAATGATAATGCAGCAGCGTCTCCCAGAGGAGGGGACATGGGTGGGGAGGATACACCATAA | 2247 | 45.39 | MGEKWVIDLRCSYDSCSVQRGRTMGLGSREKTMNWRWMEMVSLIVLCILGLKLTTIEAATDPSDASALRVLYTSLNSPPQLTQWNANGDDPCGQSWKGITCSGTRVTEINLSGLALSGSMGYQLASLTSLTNLDMSNNNIGGSIVYQLPPFLQRLNLAQNSFTEGIPYSISQMTTLRYLNLSHNQLQNPLIDMFGQLTSLSTLDLSFNAMSGELPQSFSSLSSISTMNLQNNQFTGTINVLANLPLDNLNVENNRFSGWIPEQLKSINLQTNGNSWNSGPAPPPPPGTPPATRRNRSHDSGGNSPSNGGSGEGQKSGISGGAIAGIIISVLVAGAVVAFFIVRKRSKRSSSADIEKLDNQPPQPRQMTPAQEIKSEETSSTFYPTTFDTSAAINLKPPPSDRHKSLDEDDFAKRAVVKKASAAPINVKSYSIADLQLATGSFNFENLLGEGSFGRVYRAEFDDGKILAVKKINSAVLPGDLSEDFTDIVSKVSELHHPNITELVGYCSEHGQHLLVYEFHKNGSLYDFLHHSDEYNQPLIWNSRVKIALGTARALEYLHEVCSPSIVHRNIKSANILLDAELSPHLSDSGLESFVPNADQALDHNASSGYTAPEVTMSGLYTLKSDVYSFGVVMLELLTGRKPFDSSRPRTEQSLVRWATPQLHDIDALTKMVDPELQGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNAAASPRGGDMGGEDTP | 748 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 4628073 | 4633007 | - | Carg13895-RA | Car08g00721 | 153295 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car08g00721 | 748 | MobiDBLite | consensus disorder prediction | 270 | 316 | - | - | |
Car08g00721 | 748 | ProSiteProfiles | Protein kinase domain profile. | 442 | 717 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car08g00721 | 748 | MobiDBLite | consensus disorder prediction | 728 | 748 | - | - | |
Car08g00721 | 748 | Pfam | Leucine Rich repeat | 173 | 188 | IPR001611 | GO:0005515 | |
Car08g00721 | 748 | Pfam | Leucine Rich repeat | 127 | 145 | IPR001611 | GO:0005515 | |
Car08g00721 | 748 | MobiDBLite | consensus disorder prediction | 350 | 379 | - | - | |
Car08g00721 | 748 | MobiDBLite | consensus disorder prediction | 293 | 314 | - | - | |
Car08g00721 | 748 | Pfam | Leucine rich repeat N-terminal domain | 62 | 102 | IPR013210 | - | |
Car08g00721 | 748 | MobiDBLite | consensus disorder prediction | 355 | 379 | - | - | |
Car08g00721 | 748 | ProSitePatterns | Protein kinases ATP-binding region signature. | 448 | 471 | IPR017441 | GO:0005524 | |
Car08g00721 | 748 | Pfam | Protein tyrosine and serine/threonine kinase | 443 | 714 | IPR001245 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car08g00721 | Car14g01082 | CCT | |
Car01g00018 | Car08g00721 | CCT | |
Car08g00721 | Car17g00608 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g00018 | Car-Chr1:92178 | Car08g00721 | Car-Chr8:4628073 | 0 | dispersed | |
Car04g00906 | Car-Chr4:5174426 | Car08g00721 | Car-Chr8:4628073 | 0 | dispersed | |
Car06g00077 | Car-Chr6:478346 | Car08g00721 | Car-Chr8:4628073 | 4.64E-140 | dispersed | |
Car08g00721 | Car-Chr8:4628073 | Car15g01289 | Car-Chr15:10058747 | 0 | dispersed | |
Car14g01082 | Car-Chr14:9516086 | Car08g00721 | Car-Chr8:4628073 | 1.73E-118 | dispersed | |
Car04g01906 | Car-Chr4:11252302 | Car08g00721 | Car-Chr8:4628073 | 2.07E-65 | transposed | |
Car14g01081 | Car-Chr14:9513853 | Car08g00721 | Car-Chr8:4628073 | 2.21E-46 | wgd | |
Car17g00608 | Car-Chr17:5738112 | Car08g00721 | Car-Chr8:4628073 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89052 | PF07714 | PK_Tyr_Ser-Thr | 5.90E-43 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car08g00721 | - | - | csv:101213107 | 1141.72 |