Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00773 ATGGAGTCCGGTTCTTTTGATCAGAACATCAGGGGAGTGCCCACCCATGGCGGTCGATACATTCAATACAATTTGTATGGGAATCTCTTTGAAGTTTCTAGGAAGTATATTCCACCCATAAAGCCAGTTGGTAGAGGAGCTTATGGTATTGTCTGTGCTGCTACTAATTCAGAAACAAATGAGGAGGTTGCTATTAAGAAGGTTGGCAATGCATTTGACAATAGGATTGATGCTAAAAGAACCTTGCGGGAAATCAAACTTCTTCGTCACATGGATCATGAAAATATCATTGCTCTTAAAGATATTATAAGACCTCCTCAGAAGGAGAATTTCAACGATGTGTACCTTGTTTATGAATTGATGGATACTGATCTAAATCAGATAATACGGTCCAACCAATCGTTGACTGATGACCATTGTCGGTTCTTTCTGTACCAGTTGTTACGAGGCCTAAAATACGTACATTCCGCTAATGTTCTACATCGTGATCTGAAACCAAGCAATTTGTTCCTCAATGCAAATTGTGACCTAAAACTTGGGGACTTTGGGCTTGCAAGGACAACTTCTGAGACTGATTTTATGACTGAGTACGTTGTTACTCGGTGGTACCGTGCACCGGAATTGCTTCTTAATTGTTCGGAATACACTGGAGCAATAGACATTTGGTCTGTTGGCTGTATACTTGGTGAAATTATGCACAGGAAACCACTGTTTCCTGGAAAAGATTATGTCCATCAGCTTAAACTTATTACTGAGCTCATTGGGTCACCTGACGACTCGAGCCTCGGGTTCTTACGAAGTGACAATCCACGAAAATATTTTAAAAATATTCCTCACTTCCCGAGGCAACCGTTCTCCACTAAATTTCCCACGATGTCTCCTGCTGCTATCGACTTGCTGGAGAAGATGCTTGTCTTTGATCCTACTAAACGCATTACAGTTGATGAGGCGTTGAGGCATCCATACTTGGCACCTCTTCATGATATCAATGAGGAGCCAGTATGTCCGAGGCTTTTCAGTTTTGACTTCGAGCAACCGTCGTTTACCGAAGAAAACATCAAGGAACTTGTATGGAGAGAATCCGTGAAGTTCAACCCGGATCCCGCTTGA 1110 42.16 MESGSFDQNIRGVPTHGGRYIQYNLYGNLFEVSRKYIPPIKPVGRGAYGIVCAATNSETNEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENIIALKDIIRPPQKENFNDVYLVYELMDTDLNQIIRSNQSLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKLGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIMHRKPLFPGKDYVHQLKLITELIGSPDDSSLGFLRSDNPRKYFKNIPHFPRQPFSTKFPTMSPAAIDLLEKMLVFDPTKRITVDEALRHPYLAPLHDINEEPVCPRLFSFDFEQPSFTEENIKELVWRESVKFNPDPA 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5057199 5061395 + Carg13843-RA Car08g00773 153347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00773 369 ProSitePatterns MAP kinase signature. 72 175 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car08g00773 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 368 - -
Car08g00773 369 SMART serkin_6 37 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00773 369 ProSiteProfiles Protein kinase domain profile. 37 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00773 369 Pfam Protein kinase domain 41 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00773 369 Gene3D Phosphorylase Kinase; domain 1 20 360 - -
Car08g00773 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Car08g00773 369 Gene3D Transferase(Phosphotransferase) domain 1 121 350 - -
Car08g00773 369 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524
Car08g00773 369 CDD STKc_TEY_MAPK 30 366 - -
Car08g00773 369 SUPERFAMILY Protein kinase-like (PK-like) 40 330 IPR011009 -
Car08g00773 369 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 14 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01197 Car-Chr2:8146811 Car08g00773 Car-Chr8:5057199 0 dispersed
Car08g00773 Car-Chr8:5057199 Car12g00083 Car-Chr12:366900 0 dispersed
Car13g00135 Car-Chr13:1214986 Car08g00773 Car-Chr8:5057199 2.52E-52 dispersed
Car15g01126 Car-Chr15:8878926 Car08g00773 Car-Chr8:5057199 0 wgd
Car17g00415 Car-Chr17:2757354 Car08g00773 Car-Chr8:5057199 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89054 PF00069 Pkinase 4.80E-72 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00773 K20600 - csv:101215189 712.605