Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00802 ATGGTTTTGTTCCTGATTTCTGATTCGAAACTTATGCAGAATCGATGGGCAGAGATGTTTCCATGTATGATTGCTCGAACGACAACCACCGATGTGATCTCCAGTGGCATGGGCGGAACAAGGAATGGTGCACTTCAACTGATGCATGCCGAGCTTCAAGTCCTCTCACCGTTAGTACCCGTCCGGGAAGTCAATTTTCTACGGTTTTGCAAGCAGCACGCCGAAGGGGTTTGGGCTGTCGTCGACCTATCGGTGGACGCCATGCGAGAGACTCCAACCAGTGGTTCCTCATTCATCAACTGCAGAAGGCTTCCTTCTGGGTGTGTCGTACAAGACATGCCCAATGGATATTCCAAGGTTACGTGGGTGGAACATGCAGAGTACGATGATAGCCAAGTTCATCAGCTATACCGACCGCTTCTCAGCTCTGGTATGGGATTTGGAGCGCAACGGTGGGTTGCTACCCTTCAACGACAATGCGAGTGTCTTGCTATCCTCATGTCGTCTGCTGTACCTGTTCGAGATCACACTGCGATAACTGCAGGTGGGCGACGTAGTATGCTGAAGCTAGCGCAACGAATGACAGCGAACTTCTGTGCGGGTGTGTGTGCATCGACGGTGCATAAATGGAACAAGCTGAATGCTGGTAGTGTGGATGAGGACGTTCGTGTCATGACACGAAAGAGCGTCGACGATCCTGGTGAACCACCAGGCATTGTGTTGAGTGCTGCTACGTCGGCTATGAATGCGAACCAGAGCAGTATGTTGATTCTACAAGAGACTTGCATAGATGCGGCTGGGTCCCTTGTGGTGTACGCGCCGGTGGATATTCCGGCTATGCACGTCGTGATGAACGGCGGCGATTCGGCGTATGTGGCGCTTCTGCCATCTGGGTTTGCTATAGTACCTGACGGGGCGGTGAGTCGAGGGCTGACAACGACGAACGGCAGCAGTCCAAGTGGCGGGGATGGGCCACAGAGTCAGAGAGTGACAGGCGGTGGTGGGTCCCTCCTGACCGTCGCGTTTCAAATACTCGTGAATAGCCTTCCTACAGCCAAGCTCACCGTGGAATCCGTTGAAACGGTCAATAATCTCATCTCTTGCACCGTTCAAAAGATCAAGGCCGCTCTTCAATGTGAAACCTGA 1146 52.71 MVLFLISDSKLMQNRWAEMFPCMIARTTTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDLSVDAMRETPTSGSSFINCRRLPSGCVVQDMPNGYSKVTWVEHAEYDDSQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAVPVRDHTAITAGGRRSMLKLAQRMTANFCAGVCASTVHKWNKLNAGSVDEDVRVMTRKSVDDPGEPPGIVLSAATSAMNANQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGAVSRGLTTTNGSSPSGGDGPQSQRVTGGGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCET 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5391338 5394132 + Carg27109-RA Car08g00802 153376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00802 381 Pfam START domain 11 162 IPR002913 GO:0008289
Car08g00802 381 MobiDBLite consensus disorder prediction 310 330 - -
Car08g00802 381 ProSiteProfiles START domain profile. 1 165 IPR002913 GO:0008289
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00802 Car-Chr8:5391338 Car18g01138 Car-Chr18:11310355 1.02E-158 dispersed
Car08g00802 Car-Chr8:5391338 Car17g00018 Car-Chr17:71992 1.84E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00802 K09338 - gmx:100811873 592.808