Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00824 ATGGACAACTACGGTTCTTCGCCATCGTATCCGTACCACAATCCATATGCATACCCTTGTTCAGCTCCCCGTCAATACCCACCTGCTTCTCAATATCCACCTTCTCAATATCTACATCCTCATTATGCACATCCAAGTTTCGATCCATATGGTCGTCCTCTTTACCCTTACCCCTATAGTCCTTCACATGTCGCTCCGTATGCGTATCCCCCACACCCATCCCATTCTGGGTTAATAGAGTATATTCAACATCCACCTTCGTATTCTGGTCTTGTATCTTACCCTTATCCTTACCCTGATGCCTCATCGCCTAATAGTGGTGCTAGGCCATCCATTCATTATCATAGCAATTTCCAACATGGTACATCCCCATATCGGTATCAAGAATCTATCGCATACCCTTCACCAGAAACTCAATACCGACCACCCCCTTCACGAGTAAATAGCTTCTCTAGTCACTACAGGATTGATAACACTGATTCAGGCTCTTCTGCTCACCTGCCTATTGATGACCTTTTGTGCAATGTACATTTGTCTGATCATCAACCAAATGCTCCTGCTTCACCTCCTGCACCTGCTGCTGCACCTGTACCTGCACAACCTTCAGCTTCTTTATTGGCGAATTCTCCTCAAAGCATGAGATATGATCGGCGCGATCGATTTTATGGCTTTCCCAATTCATCCTTTTCTAGTTTCGATGTGGGGAATTCCGATCAATTGACTGCATCCAAGCAACCTTTGTTTTCCCATTCAAGCTCATTTGGTGGGTCTCAACATAATCAGAACTTGCAGATTGTTCCGTTGCACAGTAAAGCATCATTGAAAGTCTTGCTGTTGCATGGAAACTTAGAAATATGGATTAATGAGGCCAGAAATCTTCCAAATATGGACATGTTTCACAAAACCTTGGGGGATATGTTTGCTAAATTACCTGGCAAAATTGAAGGACGCGTGAGTCATAAGATCACTAGTGATCCTTATGTATCGATATCTGTAGCAAATGCAATAATTGGGAGGACTTTTGTTATAAGCAACAATGAAAACCCTGTATGGAGGCAACATTTCTATGTTCCCGTTGCACATTATGTTGCTGAAGTACTTTTTTTCGTTAAAGACAGTGATGTTGTTGGTTCACAGCTAATAGGAACTGTAGCAATTCCTGCAGAACAAATATATTCAGGGTCTATAGTTGAGGGAACCTTCCCAATCCTAAATAATGGGAAGCCATGTAAACCTGGAGCTGCACTGAACTTTTCTATTCAATATACCCCAATGGAGAGGCTCAGTGCTTATCATCATGGAGTGGGAGCTGGTCCTGATTATCAGGGAGTTCCTGATACATATTTCCCCCTCAGAAAGGGTGGAGCTGTTACTCTTTATCAAGATGCTCATGTTCCAGACGGTCACCTTCCAAATTTGATGCTTGATAATGGTATGTACTATGTACATGGGAAATGTTGGCATGACATCTTTGATTCCGTACGTCAGGCTCGCAGGTTAATTTACATAACGGGGTGGTCAGTGTGGCACAAAGTGAAACTAGTTCGAGATACTGGCTATGGGACAGAGTGTACCCTTGGAGATCTCCTGAGGTCCAAGTCCCAGGAGGGAGTGAGAGTTCTGCTTCTTGTTTGGGACGATCCCACTTCTAGGAGCATTTTGGGTTATAAAACTGATGGTTTCATGCAAACCCATGATGAAGAAACTCGCAGGTTTTTCAAACACTCCTCCGTTCAAGTGATACTTTGTCCTCGCATGGCTGGAAAACGACATAGTTGGGTTAAGCAAAAGGAAGTTGGAACTATTTATACCCACCATCAGAAAACAGTTATTGTGGATGCTGATGGTGGAAATAATAGAAGAAAAATCATAGCTTTTGTTGGAGGACTAGATTTATGCGACGGCCGGTATGATACTCCATCACATCCCATATTTCGGACACTTCAAACAGTACACAAGGATGATTACCACAATCCTACATACACGGGTAGTGCTGTTGGTTGTCCAAGAGAACCGTGGCATGATCTGCACAGCAAAATTGAGGGTCCAGCAGCATACGATGTTTTGACGAATTTTGAGGAGAGATGGAGGAGGGCTTCAAAACCTCATGGGATAAAGAAGTTGAAATCATATGATGACGCTTTGCTGCGGATTGAAAGAATTCCCGACATAATTGGAATTTCGGAATCTTACTGCACTAATGAAAATGACCCTGAATCATGGCATGTCCAGATTTTTCGCTCAATTGATTCAAGTTCTGTTAAAGATTTCCCAAAGGAACCAAAAGATGCCCCCAGCAAGAACCTTGTATGTGGAAAGAATGTGCTGATTGACATGAGTATACACACAGCATATGTGAAAGCCATCCGAGCTGCCCAACATTACATTTATATAGAGAACCAATATTTTATTGGGTCATCCTTCAATTGGAACTCAAACAAAGATTTAGGTGCCAACAATTTGATCCCAATGGAAATTGCACTAAAGATTGCTGATAAAATCAGAGCAAGTGAGAGGTTTGCTGCATATATTCTCATTCCCATGTGGCCGGAGGGCGTTCCAACTGCTGCTGCCACTCAGAGGATATTATTTTGGCAGCAAAAAACGATGCAAATGATGTATGAAGTCATCTATAAGGCTTTGATGGAGGTTGGTCTTGAGGATGCATTCTCTCCTCAAGACTATTTGAACTTCTTCTGCCTGGGAAATCGTGAGGCTACGGAGGGAAATGATTCTTTGTGTTCTGAAAGTCCTAATGCAGAAAACACCCCTCAGGCACTTAGTCGGAAAAGCAGAAGGTTTATGGTGTACGTTCACTCCAAAGGCATGATAGTTGACGACGAGTTTGTGATTTTGGGATCTGCTAACATCAACCAGAGGTCCATGGATGGAACTAGAGACACTGAGATTGCTATGGGAGCCTATCAACCTCACTATACGTGGGCAAGGAAAGTTTCACGTCCTCGTGGACAGATCTATGGATATCGGATGTCGTTGTGGGCGGAGCATACGGGAACTATGGAAGACTGTTTCAACCAACCAGAGAGCCTGGAATGCGTGAAAAAACTTAGAACAATTGGAGAATCAAACTGGAAACAATTTGCTGGAGAAGATGTAACAGAGATGAGAGGACATCTTCTGAAGTACCCTGTTGAAGTTGATAGAAGAGGGAGAGTAAGATCTCTTCCTGGACATGAAAACTTCCCAGACGTAGGAGGAAAAATAGTTGGTTCATTTCTTGGCATTCATGAGAACCTCACTATCTAA 3267 42.94 MDNYGSSPSYPYHNPYAYPCSAPRQYPPASQYPPSQYLHPHYAHPSFDPYGRPLYPYPYSPSHVAPYAYPPHPSHSGLIEYIQHPPSYSGLVSYPYPYPDASSPNSGARPSIHYHSNFQHGTSPYRYQESIAYPSPETQYRPPPSRVNSFSSHYRIDNTDSGSSAHLPIDDLLCNVHLSDHQPNAPASPPAPAAAPVPAQPSASLLANSPQSMRYDRRDRFYGFPNSSFSSFDVGNSDQLTASKQPLFSHSSSFGGSQHNQNLQIVPLHSKASLKVLLLHGNLEIWINEARNLPNMDMFHKTLGDMFAKLPGKIEGRVSHKITSDPYVSISVANAIIGRTFVISNNENPVWRQHFYVPVAHYVAEVLFFVKDSDVVGSQLIGTVAIPAEQIYSGSIVEGTFPILNNGKPCKPGAALNFSIQYTPMERLSAYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLMLDNGMYYVHGKCWHDIFDSVRQARRLIYITGWSVWHKVKLVRDTGYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVQVILCPRMAGKRHSWVKQKEVGTIYTHHQKTVIVDADGGNNRRKIIAFVGGLDLCDGRYDTPSHPIFRTLQTVHKDDYHNPTYTGSAVGCPREPWHDLHSKIEGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLRIERIPDIIGISESYCTNENDPESWHVQIFRSIDSSSVKDFPKEPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDLGANNLIPMEIALKIADKIRASERFAAYILIPMWPEGVPTAAATQRILFWQQKTMQMMYEVIYKALMEVGLEDAFSPQDYLNFFCLGNREATEGNDSLCSESPNAENTPQALSRKSRRFMVYVHSKGMIVDDEFVILGSANINQRSMDGTRDTEIAMGAYQPHYTWARKVSRPRGQIYGYRMSLWAEHTGTMEDCFNQPESLECVKKLRTIGESNWKQFAGEDVTEMRGHLLKYPVEVDRRGRVRSLPGHENFPDVGGKIVGSFLGIHENLTI 1088
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5496173 5505930 - Carg11100-RA Car08g00824 153398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00824 1088 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 934 961 IPR001736 GO:0003824
Car08g00824 1088 MobiDBLite consensus disorder prediction 134 162 - -
Car08g00824 1088 ProSiteProfiles C2 domain profile. 259 401 IPR000008 -
Car08g00824 1088 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 601 636 IPR001736 GO:0003824
Car08g00824 1088 Pfam Phospholipase D Active site motif 602 636 IPR001736 GO:0003824
Car08g00824 1088 Pfam Phospholipase D C terminal 1008 1078 IPR024632 -
Car08g00824 1088 Pfam PLD-like domain 934 970 IPR025202 -
Car08g00824 1088 MobiDBLite consensus disorder prediction 142 162 - -
Car08g00824 1088 MobiDBLite consensus disorder prediction 180 209 - -
Car08g00824 1088 Pfam C2 domain 281 403 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00275 Car-Chr5:1508172 Car08g00824 Car-Chr8:5496173 0 dispersed
Car06g00647 Car-Chr6:3875202 Car08g00824 Car-Chr8:5496173 0 dispersed
Car01g00054 Car-Chr1:297088 Car08g00824 Car-Chr8:5496173 5.74E-176 transposed
Car01g00123 Car-Chr1:625607 Car08g00824 Car-Chr8:5496173 0 transposed
Car05g00326 Car-Chr5:1771728 Car08g00824 Car-Chr8:5496173 0 transposed
Car08g00568 Car-Chr8:3743854 Car08g00824 Car-Chr8:5496173 0 transposed
Car17g00003 Car-Chr17:17533 Car08g00824 Car-Chr8:5496173 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00824 K01115 - csv:101218942 1957.18