Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car08g00833 | ATGGATGGAATTTCACCCCACAATCGCCCTCTTCCTCCTCTTTTTCTCTCCAAAGATCTCCACCTCCACCATGGGTTATTTCACCACCACCAAAACTCCGACGACGACGCCGCCGCTGGATCTAGTGGTTCTAAGAGAGATCGGGAGGAGGAAAACCCAATCACGGCTGTGGCAACGGCGGCGGACAGTAAGGAATTGTCTAATTCCTCTTCTCGACGACCACGTGGCCGACCAGCTGGCTCCAAAAACAAGCCGAAGCCGCCTATTATTATCACTAGAGACAGCGCCAACGCTCTCAGATCCCATCTCATTGAAATCGCCTCCGGCTCCGACATCGTCGACTCTCTCACCACCTTTGCGCGGCGGCGTCAACGCGGCGTTTGTATTTTAAGCGCTACCGGAACTGTCACCAACGTCAATCTCCGGCAGCCGGCTTCTCCAGGTGCTGTTATCAATTTACATGGCAGATTTGAAATTCTCTCCCTCTCTGGCTCCTTCCTCCCACCGCCGGCTCCCCCGGCCGCCTCCGGGCTGACCGTTTATTTAGCTGGCGGGCAGGGGCAGGTGGTGGGTGGGAATGTAATCGGCCCATTTTTGTCCTCCGGTCCGGTGATTATTATGGCGGCTTCTTTTGGTAATGCGGCGTACGAACGACTCCCGATTGATGACGACGACGAGACTTCTCCGGCGGCGGAGATGACTGGACAACCGGCGGTGACCCCACCGCAGCCGCAATTGTTGGGGGATCCTAATGGGGGATTGTTTCATGGGGTGGCGCAGAATGTTGTGAATTCTTCATGCCAATTGCCGACTGAGGCGGCGGCGGCGGCGGCGGCGCTTTGGAGAGGAGGTCGGCCACCGTATTGA | 867 | 56.98 | MDGISPHNRPLPPLFLSKDLHLHHGLFHHHQNSDDDAAAGSSGSKRDREEENPITAVATAADSKELSNSSSRRPRGRPAGSKNKPKPPIIITRDSANALRSHLIEIASGSDIVDSLTTFARRRQRGVCILSATGTVTNVNLRQPASPGAVINLHGRFEILSLSGSFLPPPAPPAASGLTVYLAGGQGQVVGGNVIGPFLSSGPVIIMAASFGNAAYERLPIDDDDETSPAAEMTGQPAVTPPQPQLLGDPNGGLFHGVAQNVVNSSCQLPTEAAAAAAALWRGGRPPY | 288 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5568596 | 5569462 | - | Carg11091-RA | Car08g00833 | 153407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car08g00833 | 288 | MobiDBLite | consensus disorder prediction | 29 | 53 | - | - | |
Car08g00833 | 288 | MobiDBLite | consensus disorder prediction | 221 | 245 | - | - | |
Car08g00833 | 288 | MobiDBLite | consensus disorder prediction | 61 | 76 | - | - | |
Car08g00833 | 288 | MobiDBLite | consensus disorder prediction | 29 | 90 | - | - | |
Car08g00833 | 288 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 100 | 212 | IPR005175 | - | |
Car08g00833 | 288 | ProSiteProfiles | PPC domain profile profile. | 96 | 236 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g01275 | Car-Chr2:8548085 | Car08g00833 | Car-Chr8:5568596 | 2.47E-89 | dispersed | |
Car06g00967 | Car-Chr6:7419418 | Car08g00833 | Car-Chr8:5568596 | 1.12E-79 | dispersed | |
Car08g00833 | Car-Chr8:5568596 | Car15g01063 | Car-Chr15:8368800 | 3.63E-81 | dispersed | |
Car17g00027 | Car-Chr17:118146 | Car08g00833 | Car-Chr8:5568596 | 4.65E-130 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car08g00833 | - | - | csv:101220133 | 410.223 |