Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00833 ATGGATGGAATTTCACCCCACAATCGCCCTCTTCCTCCTCTTTTTCTCTCCAAAGATCTCCACCTCCACCATGGGTTATTTCACCACCACCAAAACTCCGACGACGACGCCGCCGCTGGATCTAGTGGTTCTAAGAGAGATCGGGAGGAGGAAAACCCAATCACGGCTGTGGCAACGGCGGCGGACAGTAAGGAATTGTCTAATTCCTCTTCTCGACGACCACGTGGCCGACCAGCTGGCTCCAAAAACAAGCCGAAGCCGCCTATTATTATCACTAGAGACAGCGCCAACGCTCTCAGATCCCATCTCATTGAAATCGCCTCCGGCTCCGACATCGTCGACTCTCTCACCACCTTTGCGCGGCGGCGTCAACGCGGCGTTTGTATTTTAAGCGCTACCGGAACTGTCACCAACGTCAATCTCCGGCAGCCGGCTTCTCCAGGTGCTGTTATCAATTTACATGGCAGATTTGAAATTCTCTCCCTCTCTGGCTCCTTCCTCCCACCGCCGGCTCCCCCGGCCGCCTCCGGGCTGACCGTTTATTTAGCTGGCGGGCAGGGGCAGGTGGTGGGTGGGAATGTAATCGGCCCATTTTTGTCCTCCGGTCCGGTGATTATTATGGCGGCTTCTTTTGGTAATGCGGCGTACGAACGACTCCCGATTGATGACGACGACGAGACTTCTCCGGCGGCGGAGATGACTGGACAACCGGCGGTGACCCCACCGCAGCCGCAATTGTTGGGGGATCCTAATGGGGGATTGTTTCATGGGGTGGCGCAGAATGTTGTGAATTCTTCATGCCAATTGCCGACTGAGGCGGCGGCGGCGGCGGCGGCGCTTTGGAGAGGAGGTCGGCCACCGTATTGA 867 56.98 MDGISPHNRPLPPLFLSKDLHLHHGLFHHHQNSDDDAAAGSSGSKRDREEENPITAVATAADSKELSNSSSRRPRGRPAGSKNKPKPPIIITRDSANALRSHLIEIASGSDIVDSLTTFARRRQRGVCILSATGTVTNVNLRQPASPGAVINLHGRFEILSLSGSFLPPPAPPAASGLTVYLAGGQGQVVGGNVIGPFLSSGPVIIMAASFGNAAYERLPIDDDDETSPAAEMTGQPAVTPPQPQLLGDPNGGLFHGVAQNVVNSSCQLPTEAAAAAAALWRGGRPPY 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5568596 5569462 - Carg11091-RA Car08g00833 153407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00833 288 MobiDBLite consensus disorder prediction 29 53 - -
Car08g00833 288 MobiDBLite consensus disorder prediction 221 245 - -
Car08g00833 288 MobiDBLite consensus disorder prediction 61 76 - -
Car08g00833 288 MobiDBLite consensus disorder prediction 29 90 - -
Car08g00833 288 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 212 IPR005175 -
Car08g00833 288 ProSiteProfiles PPC domain profile profile. 96 236 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01275 Car-Chr2:8548085 Car08g00833 Car-Chr8:5568596 2.47E-89 dispersed
Car06g00967 Car-Chr6:7419418 Car08g00833 Car-Chr8:5568596 1.12E-79 dispersed
Car08g00833 Car-Chr8:5568596 Car15g01063 Car-Chr15:8368800 3.63E-81 dispersed
Car17g00027 Car-Chr17:118146 Car08g00833 Car-Chr8:5568596 4.65E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00833 - - csv:101220133 410.223