Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00858 ATGTACACGGCGGTGCTCGCGGCGGCGCTGGTAGCTGTAGCGGCCACAGTCTGGGTGTTGAAGAATGCGAACCGGTGGATCCACGAAACCTTCCGGTTGGGTTCAAAACGGTTCAACCTCCCACCCGGGGATCTGGGCTGGCCGTTCATCGGCAACATGTGGTCCTTTCTCAGAGCTTTCAAGTCCTCTCGTCCTGATTCCTTCATGGAGTCCTTCGTCGCCAGGTATGGACGTACAGATATGTATAAATGTTTCATGTTTGGAAGTCCAAGTGTGATTGTGACATCAGCTGAAGCATGCAAAAGAGTTTTGAATGACGATGATGCGTTTGGTTCAGGATGGCCTCGTTCCACCCTGAAACTCATTGGAGAGAAGTCGTTCATTGGGATTTCTTCCAAAGAACACAAGCGTCTTCGTCGTATAACTGCCGCGCCGGTCAATGGCTACGAGGCATTGGCTACGTACCTCACGTATATAGAAAATATGACGGTTGCTTCATTGCAAAAATGGCCTTCCATGGGACAAATAGAGTTCTTAACTGAGCTACGTAAGCTTACTTTCAAGATCATTATGTACATATTTCTTAGCTCGGAGAGCGAGGTGGTGATGGAGGCTTTGGAGAGAGAGTACACAACCTTGAATTATGGTGTGAGGGCTATGGCTATCAACATTCCCGGTTTTGCTTACCATAAAGCACTCAAGGCACGAAAGAACCTCGTTATGACATTTCAATCAATTGTGAGTCAGCGAAGGAAGGAAAGGGATAATGACGTGGCAACGACGAGAAGAGATATGATGGACGCTTTGCTAGATGTAGAAGATGAGAATGGTAGAATGTTAAGTGATGAAGAAATCATTGATGTCTTGATAATGTACTTGAATGCAGGCCATGAATCTTCGGGCCATACTATGATGTGGGCAACAATTTTCCTACAACAACATCCCAATTTTCTTGGAAAGGCAAAGGCCGAGCAAGAAGAGATACTTAAAAAACGACCTCCGGGGCAGAAAGGTTTAACTCTTAAGGAAGTTCGAGAAATGGACTATCTTTCAAAGGTAATCGATGAAACACTACGAGTCGTAACGTTCTCCCTCACGGTATTTCGAGAGGCAAAGCATGACGTGAACATTTGTGGTTATACCATTCCAAAAGGGTGGAAAGTGCTAGTTTGGTTTCGAAGTGTTCACTATGATCCTGAAACTTATCCAAACCCTAAACAGTTTGATCCTTCACGATGGGATGATTTCACACCAAAAGCTGGAAGCTTTCTTCCATTTGGAGGAGGAAGTAGATTGTGTCCCGGAAACGATCTTGCAAAGCTAGAAATCTCCGTCTTTCTCCATTATTTTCTCCTCAATTATCGGTTGGAAAGAGATAATCCAAATAGTCCCGTGAGGTATCTACCCCACACGAGGCCTAAAGATCAGTGTTTGGCAAGGATCAAGAGAGTTGGTGCTCCATTTGATTGA 1470 45.1 MYTAVLAAALVAVAATVWVLKNANRWIHETFRLGSKRFNLPPGDLGWPFIGNMWSFLRAFKSSRPDSFMESFVARYGRTDMYKCFMFGSPSVIVTSAEACKRVLNDDDAFGSGWPRSTLKLIGEKSFIGISSKEHKRLRRITAAPVNGYEALATYLTYIENMTVASLQKWPSMGQIEFLTELRKLTFKIIMYIFLSSESEVVMEALEREYTTLNYGVRAMAINIPGFAYHKALKARKNLVMTFQSIVSQRRKERDNDVATTRRDMMDALLDVEDENGRMLSDEEIIDVLIMYLNAGHESSGHTMMWATIFLQQHPNFLGKAKAEQEEILKKRPPGQKGLTLKEVREMDYLSKVIDETLRVVTFSLTVFREAKHDVNICGYTIPKGWKVLVWFRSVHYDPETYPNPKQFDPSRWDDFTPKAGSFLPFGGGSRLCPGNDLAKLEISVFLHYFLLNYRLERDNPNSPVRYLPHTRPKDQCLARIKRVGAPFD 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5730100 5734011 + Carg11066-RA Car08g00858 153432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00858 489 Pfam Cytochrome P450 41 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g00858 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01357 Car-Chr2:8996162 Car08g00858 Car-Chr8:5730100 8.73E-169 dispersed
Car03g00664 Car-Chr3:5918511 Car08g00858 Car-Chr8:5730100 9.12E-68 dispersed
Car08g00858 Car-Chr8:5730100 Car19g00326 Car-Chr19:5126420 1.94E-173 dispersed
Car14g01826 Car-Chr14:14216481 Car08g00858 Car-Chr8:5730100 1.28E-06 dispersed
Car14g01750 Car-Chr14:13788313 Car08g00858 Car-Chr8:5730100 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00858 K04123 - csv:101220640 791.186