Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00860 ATGGCTACTTTAAACTTAGGCTCCGCTTCTCACTTTGTTGATCAGCTTCAGCAACAACGCCCTGATCTCCACCTACAAACGCCGCCAAATTCCGACCATGTTACTAATCTCAACCACTACAACGGCGGTGGCTCTGGTGGCAGCAGTGGCGGTGATGTCATGGTTCGTAGACCTAGGGGTCGCCCGGCCGGGTCGAAGAACAAACCGAAGCCGCCTGTAATCATCACGCGCGAGAGTGCTAATACACTTCGAGCTCATATCTTGGAGGTTGGTAGCGGCTGCGATGTGTTTGAGGCGATAGCCACTTATGCGCGACGGCGACAACGGGGGATCTGCGTGTTGAGTGGAAGTGGGATCGTGAATAATGTTAGCTTGCGTCAACCGACGGCAACTGGGTCGGTGTTGACGCTTCAAGGGAGGTTTGAGATTTTATCGCTATCGGGATCGTTTCTTCCACCACCAGCTCCACCGGGTGCTACTAGTCTCACGATCTTTTTAGCTGGAGGACAAGGACAGGTCGTCGGAGGGAATGTCGTGGGAGCTTTGATGGCTTCGGGGCCAGTCATCATCATAGCGTCATCATTTAGTAACGTAGCGTATGAGAGGTTGCCATTGGAGGAAGAAGAGTTGCCGATGCAGGCAGGTGGTGGAGACGGGGACGGAGGAGACGGTGGTGACGATGGTCACAACAACCCTTTTCCCGACGCATCTTCGGGTTTGCCCTTTCTTAATCTTCCTATGAACATGCCCAATCAAAATCAATTTTTCGGTTGA 774 52.71 MATLNLGSASHFVDQLQQQRPDLHLQTPPNSDHVTNLNHYNGGGSGGSSGGDVMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFEAIATYARRRQRGICVLSGSGIVNNVSLRQPTATGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALMASGPVIIIASSFSNVAYERLPLEEEELPMQAGGGDGDGGDGGDDGHNNPFPDASSGLPFLNLPMNMPNQNQFFG 257
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 5747239 5748167 - Carg11064-RA Car08g00860 153434
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car08g00860 257 MobiDBLite consensus disorder prediction 23 73 - -
Car08g00860 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Car08g00860 257 ProSiteProfiles PPC domain profile profile. 80 216 IPR005175 -
Car08g00860 257 MobiDBLite consensus disorder prediction 23 45 - -
Car08g00860 257 MobiDBLite consensus disorder prediction 211 244 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00860 Car-Chr8:5747239 Car14g01831 Car-Chr14:14239553 2.76E-107 dispersed
Car17g00053 Car-Chr17:269123 Car08g00860 Car-Chr8:5747239 4.18E-129 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00860 - - csv:101203160 416.387