Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car08g00860 | ATGGCTACTTTAAACTTAGGCTCCGCTTCTCACTTTGTTGATCAGCTTCAGCAACAACGCCCTGATCTCCACCTACAAACGCCGCCAAATTCCGACCATGTTACTAATCTCAACCACTACAACGGCGGTGGCTCTGGTGGCAGCAGTGGCGGTGATGTCATGGTTCGTAGACCTAGGGGTCGCCCGGCCGGGTCGAAGAACAAACCGAAGCCGCCTGTAATCATCACGCGCGAGAGTGCTAATACACTTCGAGCTCATATCTTGGAGGTTGGTAGCGGCTGCGATGTGTTTGAGGCGATAGCCACTTATGCGCGACGGCGACAACGGGGGATCTGCGTGTTGAGTGGAAGTGGGATCGTGAATAATGTTAGCTTGCGTCAACCGACGGCAACTGGGTCGGTGTTGACGCTTCAAGGGAGGTTTGAGATTTTATCGCTATCGGGATCGTTTCTTCCACCACCAGCTCCACCGGGTGCTACTAGTCTCACGATCTTTTTAGCTGGAGGACAAGGACAGGTCGTCGGAGGGAATGTCGTGGGAGCTTTGATGGCTTCGGGGCCAGTCATCATCATAGCGTCATCATTTAGTAACGTAGCGTATGAGAGGTTGCCATTGGAGGAAGAAGAGTTGCCGATGCAGGCAGGTGGTGGAGACGGGGACGGAGGAGACGGTGGTGACGATGGTCACAACAACCCTTTTCCCGACGCATCTTCGGGTTTGCCCTTTCTTAATCTTCCTATGAACATGCCCAATCAAAATCAATTTTTCGGTTGA | 774 | 52.71 | MATLNLGSASHFVDQLQQQRPDLHLQTPPNSDHVTNLNHYNGGGSGGSSGGDVMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFEAIATYARRRQRGICVLSGSGIVNNVSLRQPTATGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALMASGPVIIIASSFSNVAYERLPLEEEELPMQAGGGDGDGGDGGDDGHNNPFPDASSGLPFLNLPMNMPNQNQFFG | 257 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 5747239 | 5748167 | - | Carg11064-RA | Car08g00860 | 153434 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car08g00860 | 257 | MobiDBLite | consensus disorder prediction | 23 | 73 | - | - | |
| Car08g00860 | 257 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 84 | 197 | IPR005175 | - | |
| Car08g00860 | 257 | ProSiteProfiles | PPC domain profile profile. | 80 | 216 | IPR005175 | - | |
| Car08g00860 | 257 | MobiDBLite | consensus disorder prediction | 23 | 45 | - | - | |
| Car08g00860 | 257 | MobiDBLite | consensus disorder prediction | 211 | 244 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car08g00860 | Car-Chr8:5747239 | Car14g01831 | Car-Chr14:14239553 | 2.76E-107 | dispersed | |
| Car17g00053 | Car-Chr17:269123 | Car08g00860 | Car-Chr8:5747239 | 4.18E-129 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car08g00860 | - | - | csv:101203160 | 416.387 |