Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00939 ATGGCCGGTGAGGTAGCGGTAGAGGGTGCTGCGGCGGCGACTGAAATACCCGATTCCAATCAGCAGTCCCACAAATTAGAGAGAAAATGGACCTTTTGGTTTGATAATCAGTCGCGGCCGAAGCAAGGCGCCGCTTGGGGCTCCTCTCTGCGCAAGGTCTATACCTTCGACACCGTCGAGGAATTTTGGTGTTTGTACGATCAGATACCAAAGCCGAGCAAGTTGCCGGCCAATGCAGATTTTCACTTGTTCAAATCTGGAGTTGAGCCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAATCTTGATAGCATGTGGCTGGAAACGTTGATGGCTTTAATTGGGGAACAATTCGAGGAATCTGATGAGATTTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCAGGACAAACTTGCATTATGGACAAAGAATGCAACAAATGAGGCTGCTCAGATGAGCCTTGGTAGGAAATGGAAGGAGATCATCGACGTCACCGACAAGATTTCCTTCAGCTTTCATGAGGACTTGAGGAGGGAAAAGTCGGCAAAATCTCGATACAGTGTCTGA 600 49.17 MAGEVAVEGAAAATEIPDSNQQSHKLERKWTFWFDNQSRPKQGAAWGSSLRKVYTFDTVEEFWCLYDQIPKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDSMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKNATNEAAQMSLGRKWKEIIDVTDKISFSFHEDLRREKSAKSRYSV 199
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6287030 6289542 + Carg10984-RA Car08g00939 153513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00939 199 Pfam Eukaryotic initiation factor 4E 25 181 IPR001040 GO:0003723|GO:0003743|GO:0006413
Car08g00939 199 ProSitePatterns Eukaryotic initiation factor 4E signature. 80 103 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Car08g00939 199 MobiDBLite consensus disorder prediction 1 21 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00939 Car17g00127 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00939 Car-Chr8:6287030 Car18g00418 Car-Chr18:2620258 1.61E-75 dispersed
Car17g00127 Car-Chr17:774068 Car08g00939 Car-Chr8:6287030 1.02E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00939 K03259 - csv:101208495 375.941